LOCUS PBSFLUCERLUC 6286 bp ds-DNA circular SYN 11-SEP-2007 DEFINITION . ACCESSION . VERSION . SOURCE . ORGANISM . . FEATURES Location/Qualifiers misc_feature 564..2216 /ApEinfo_label=FLuc /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature 2931..3866 /ApEinfo_label=RLuc /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature 3925..4146 /ApEinfo_label=SV40 late poly (A) signal /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 5266..6126 /ApEinfo_label=beta-lactamase /ApEinfo_fwdcolor=#00ff59 /ApEinfo_revcolor=#00ff59 misc_feature 4492..5106 /ApEinfo_label=replication region from pMB1 (the same origin of re /ApEinfo_fwdcolor=#ff5600 /ApEinfo_revcolor=#ff5600 misc_feature 247..296 /ApEinfo_label=SV40 Promoter /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 rep_origin 4507..4507 /note="pUC18 Ori; RNaseH cleavage point" /ApEinfo_label=pUC18 Ori; RNaseH cleavage point /ApEinfo_fwdcolor=SlateGray3 /ApEinfo_revcolor=SlateGray3 misc_feature 297..350 /ApEinfo_label=SV40 Promoter /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 247..296 /ApEinfo_label=Putative major transcription sites /ApEinfo_fwdcolor=#ff80c0 /ApEinfo_revcolor=#ff80c0 mRNA complement(join(359..363,365..417)) /note="19S VP1" /ApEinfo_label=19S VP1 /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 77..246 /ApEinfo_label=SV40 Promoter /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 2311..2329 /label=T7 promoter /ApEinfo_label=T7 promoter /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=cyan misc_feature 296..296 /ApEinfo_label=transcription start +1 /ApEinfo_fwdcolor=#ff3880 /ApEinfo_revcolor=#ff3880 misc_feature join(2368..2794,2796..2928) /label=EMCV_since_polyC_stretch /ApEinfo_label=EMCV_since_polyC_stretch /ApEinfo_fwdcolor=#00ccd3 /ApEinfo_revcolor=#00ccd3 misc_feature 285..285 /ApEinfo_label=transcription start +1 /ApEinfo_fwdcolor=#ff2e7b /ApEinfo_revcolor=#ff2e7b misc_feature join(2452..2794,2796..2928) /label=EMCV_IRES /ApEinfo_label=EMCV_IRES /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=cyan misc_feature 247..247 /ApEinfo_label=trasnscription_start +1 /ApEinfo_fwdcolor=#ff44be /ApEinfo_revcolor=#ff44be misc_feature 291..291 /ApEinfo_label=transcription start +1 /ApEinfo_fwdcolor=#ff3071 /ApEinfo_revcolor=#ff3071 misc_feature 2328..2328 /label=T7 transcription start +1 /ApEinfo_label=T7 transcription start +1 /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 2262..2262 /ApEinfo_label=G_inserted by IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 2264..2264 /ApEinfo_label=G changed to C by IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=green misc_feature 2362..2362 /ApEinfo_label=T_changed_to_A_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 2364..2364 /ApEinfo_label=C_changed_to_T_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 2366..2367 /ApEinfo_label=GC_changed_to_CG_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 2795..2795 /ApEinfo_label=G_changed_to_A_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 351..351 /ApEinfo_label=CC_changed_to_C_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 364..364 /ApEinfo_label=G_changed_to_A_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 423..427 /ApEinfo_label=inserted_by_Iresite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 473..489 /ApEinfo_label=inserted_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 misc_feature 495..495 /ApEinfo_label=inserted_by_IRESite /ApEinfo_fwdcolor=#690f96 /ApEinfo_revcolor=#690f96 ORIGIN 1 TAGCTTCTGT GGAATGTGTG TCAGTTAGGG TGTGGAAAGT CCCCAGGCTC CCCAGCAGGC 61 AGAAGTATGC AAAGCATGCA TCTCAATTAG TCAGCAACCA GGTGTGGAAA GTCCCCAGGC 121 TCCCCAGCAG GCAGAAGTAT GCAAAGCATG CATCTCAATT AGTCAGCAAC CATAGTCCCG 181 CCCCTAACTC CGCCCATCCC GCCCCTAACT CCGCCCAGTT CCGCCCATTC TCCGCCCCAT 241 GGCTGACTAA TTTTTTTTAT TTATGCAGAG GCCGAGGCCG CCTCGGCCTC TGAGCTATTC 301 CAGAAGTAGT GAGGAGGCTT TTTTGGAGGC CTAGGCTTTT GCAAAAAGCT CCTCGAGGaa 361 ctgAaaaacc agaaagttaa ctggtaagtt tagtcttttt gtcttttatt tcaggtcCCG 421 GAtcggaATT GGTTTAAACG AATTCGAGCT CGCCCGGGGA TCCTCTAGAG TCggggatcc 481 tctagagtcA GCTTgGAATT CCTTTGTGTT ACATTCTTGA ATGTCGCTCG CAGTGACATT 541 AGCATTCCGG TACTGTTGGT AAAATGGAAG ACGCCAAAAA CATAAAGAAA GGCCCGGCGC 601 CATTCTATCC TCTAGAGGAT GGAACCGCTG GAGAGCAACT GCATAAGGCT ATGAAGAGAT 661 ACGCCCTGGT TCCTGGAACA ATTGCTTTTA CAGATGCACA TATCGAGGTG AACATCACGT 721 ACGCGGAATA CTTCGAAATG TCCGTTCGGT TGGCAGAAGC TATGAAACGA TATGGGCTGA 781 ATACAAATCA CAGAATCGTC GTATGCAGTG AAAACTCTCT TCAATTCTTT ATGCCGGTGT 841 TGGGCGCGTT ATTTATCGGA GTTGCAGTTG CGCCCGCGAA CGACATTTAT AATGAACGTG 901 AATTGCTCAA CAGTATGAAC ATTTCGCAGC CTACCGTAGT GTTTGTTTCC AAAAAGGGGT 961 TGCAAAAAAT TTTGAACGTG CAAAAAAAAT TACCAATAAT CCAGAAAATT ATTATCATGG 1021 ATTCTAAAAC GGATTACCAG GGATTTCAGT CGATGTACAC GTTCGTCACA TCTCATCTAC 1081 CTCCCGGTTT TAATGAATAC GATTTTGTAC CAGAGTCCTT TGATCGTGAC AAAACAATTG 1141 CACTGATAAT GAATTCCTCT GGATCTACTG GGTTACCTAA GGGTGTGGCC CTTCCGCATA 1201 GAACTGCCTG CGTCAGATTC TCGCATGCCA GAGATCCTAT TTTTGGCAAT CAAATCATTC 1261 CGGATACTGC GATTTTAAGT GTTGTTCCAT TCCATCACGG TTTTGGAATG TTTACTACAC 1321 TCGGATATTT GATATGTGGA TTTCGAGTCG TCTTAATGTA TAGATTTGAA GAAGAGCTGT 1381 TTTTACGATC CCTTCAGGAT TACAAAATTC AAAGTGCGTT GCTAGTACCA ACCCTATTTT 1441 CATTCTTCGC CAAAAGCACT CTGATTGACA AATACGATTT ATCTAATTTA CACGAAATTG 1501 CTTCTGGGGG CGCACCTCTT TCGAAAGAAG TCGGGGAAGC GGTTGCAAAA CGCTTCCATC 1561 TTCCAGGGAT ACGACAAGGA TATGGGCTCA CTGAGACTAC ATCAGCTATT CTGATTACAC 1621 CCGAGGGGGA TGATAAACCG GGCGCGGTCG GTAAAGTTGT TCCATTTTTT GAAGCGAAGG 1681 TTGTGGATCT GGATACCGGG AAAACGCTGG GCGTTAATCA GAGAGGCGAA TTATGTGTCA 1741 GAGGACCTAT GATTATGTCC GGTTATGTAA ACAATCCGGA AGCGACCAAC GCCTTGATTG 1801 ACAAGGATGG ATGGCTACAT TCTGGAGACA TAGCTTACTG GGACGAAGAC GAACACTTCT 1861 TCATAGTTGA CCGCTTGAAG TCTTTAATTA AATACAAAGG ATATCAGGTG GCCCCCGCTG 1921 AATTGGAATC GATATTGTTA CAACACCCCA ACATCTTCGA CGCGGGCGTG GCAGGTCTTC 1981 CCGACGATGA CGCCGGTGAA CTTCCCGCCG CCGTTGTTGT TTTGGAGCAC GGAAAGACGA 2041 TGACGGAAAA AGAGATCGTG GATTACGTCG CCAGTCAAGT AACAACCGCG AAAAAGTTGC 2101 GCGGAGGAGT TGTGTTTGTG GACGAAGTAC CGAAAGGTCT TACCGGAAAA CTCGACGCAA 2161 GAAAAATCAG AGAGATCCTC ATAAAGGCCA AGAAGGGCGG AAAGTCCAAA TTGTAAAATG 2221 TAACTGTATT CAGCGATGAC GAAATTCTTA GCTATTGTAA TGACCTGCAG GCATGCAAGC 2281 TTGCGCAGAC GTCGCGCGCG GCCGCGAAAT TAATACGACT CACTATAGGG AGACCACAAC 2341 GGTTTCCCTC TAGCGGGATC AATTCCGCCC CCCCCCTAAC GTTACTGGCC GAAGCCGCTT 2401 GGAATAAGGC CGGTGTGCGT TTGTCTATAT GTTATTTTCC ACCATATTGC CGTCTTTTGG 2461 CAATGTGAGG GCCCGGAAAC CTGGCCCTGT CTTCTTGACG AGCATTCCTA GGGGTCTTTC 2521 CCCTCTCGCC AAAGGAATGC AAGGTCTGTT GAATGTCGTG AAGGAAGCAG TTCCTCTGGA 2581 AGCTTCTTGA AGACAAACAA CGTCTGTAGC GACCCTTTGC AGGCAGCGGA ACCCCCCACC 2641 TGGCGACAGG TGCCTCTGCG GCCAAAAGCC ACGTGTATAA GATACACCAT GCAAAGGCGG 2701 CACAACCCCA GTGCCACGTT GTGAGTTGGA TAGTTGTGGA AAGAGTCAAA TGGCTCTCCT 2761 CAAGCGTATT CAACAAGGGG CTGAAGGATG CCCAAAAGGT ACCCCATTGT ATGGGATCTG 2821 ATCTGGGGCC TCGGTGCACA TGCTTTACAT GTGTTTAGTC GAGGTTAAAA AACGTCTAGG 2881 CCCCCCGAAC CACGGGGACG TGGTTTTCCT TTGAAAAACA CGATGATACC ATGACTTCGA 2941 AAGTTTATGA TCCAGAACAA AGGAAACGGA TGATAACTGG TCCGCAGTGG TGGGCCAGAT 3001 GTAAACAAAT GAATGTTCTT GATTCATTTA TTAATTATTA TGATTCAGAA AAACATGCAG 3061 AAAATGCTGT TATTTTTTTA CATGGTAACG CGGCCTCTTC TTATTTATGG CGACATGTTG 3121 TGCCACATAT TGAGCCAGTA GCGCGGTGTA TTATACCAGA CCTTATTGGT ATGGGCAAAT 3181 CAGGCAAATC TGGTAATGGT TCTTATAGGT TACTTGATCA TTACAAATAT CTTACTGCAT 3241 GGTTTGAACT TCTTAATTTA CCAAAGAAGA TCATTTTTGT CGGCCATGAT TGGGGTGCTT 3301 GTTTGGCATT TCATTATAGC TATGAGCATC AAGATAAGAT CAAAGCAATA GTTCACGCTG 3361 AAAGTGTAGT AGATGTGATT GAATCATGGG ATGAATGGCC TGATATTGAA GAAGATATTG 3421 CGTTGATCAA ATCTGAAGAA GGAGAAAAAA TGGTTTTGGA GAATAACTTC TTCGTGGAAA 3481 CCATGTTGCC ATCAAAAATC ATGAGAAAGT TAGAACCAGA AGAATTTGCA GCATATCTTG 3541 AACCATTCAA AGAGAAAGGT GAAGTTCGTC GTCCAACATT ATCATGGCCT CGTGAAATCC 3601 CGTTAGTAAA AGGTGGTAAA CCTGACGTTG TACAAATTGT TAGGAATTAT AATGCTTATC 3661 TACGTGCAAG TGATGATTTA CCAAAAATGT TTATTGAATC GGACCCAGGA TTCTTTTCCA 3721 ATGCTATTGT TGAAGGTGCC AAGAAGTTTC CTAATACTGA ATTTGTCAAA GTAAAAGGTC 3781 TTCATTTTTC GCAAGAAGAT GCACCTGATG AAATGGGAAA ATATATCAAA TCGTTCGTTG 3841 AGCGAGTTCT CAAAAATGAA CAATAAGTCG ACCTGCAGAA GCTTGCGCAG ACGTCGCGCG 3901 CGGCCGCTTA AGCTAGCTTC GATCCAGACA TGATAAGATA CATTGATGAG TTTGGACAAA 3961 CCACAACTAG AATGCAGTGA AAAAAATGCT TTATTTGTGA AATTTGTGAT GCTATTGCTT 4021 TATTTGTAAC CATTATAAGC TGCAATAAAC AAGTTAACAA CAACAATTGC ATTCATTTTA 4081 TGTTTCAGGT TCAGGGGGAG GTGTGGGAGG TTTTTTAAAG CAAGTAAAAC CTCTACAAAT 4141 GTGGTATGGC TGATTATGAT CCTGCCTCGC GCGTTTCGGT GATGACGGTG AAAACCTCTG 4201 ACACATGCAG CTCCCGCCTT AATTAAGGGT TTAAACCCGG TACCCAGTCA CGTAGCGATA 4261 GCGGAGTGTA CTGCATTAAT GAATCGGCCA ACGCGCGGGG AGAGGCGGTT TGCGTATTGG 4321 GCGCTCTTCC GCTTCCTCGC TCACTGACTC GCTGCGCTCG GTCGTTCGGC TGCGGCGAGC 4381 GGTATCAGCT CACTCAAAGG CGGTAATACG GTTATCCACA GAATCAGGGG ATAACGCAGG 4441 AAAGAACATG TGAGCAAAAG GCCAGCAAAA GGCCAGGAAC CGTAAAAAGG CCGCGTTGCT 4501 GGCGTTtTTC CATAGGCTCC GCCCCCCTGA CGAGCATCAC AAAAATCGAC GCTCAAGTCA 4561 GAGGTGGCGA AACCCGACAG GACTATAAAG ATACCAGGCG TTTCCCCCTG GAAGCTCCCT 4621 CGTGCGCTCT CCTGTTCCGA CCCTGCCGCT TACCGGATAC CTGTCCGCCT TTCTCCCTTC 4681 GGGAAGCGTG GCGCTTTCTC ATAGCTCACG CTGTAGGTAT CTCAGTTCGG TGTAGGTCGT 4741 TCGCTCCAAG CTGGGCTGTG TGCACGAACC CCCCGTTCAG CCCGACCGCT GCGCCTTATC 4801 CGGTAACTAT CGTCTTGAGT CCAACCCGGT AAGACACGAC TTATCGCCAC TGGCAGCAGC 4861 CACTGGTAAC AGGATTAGCA GAGCGAGGTA TGTAGGCGGT GCTACAGAGT TCTTGAAGTG 4921 GTGGCCTAAC TACGGCTACA CTAGAAGGAC AGTATTTGGT ATCTGCGCTC TGCTGAAGCC 4981 AGTTACCTTC GGAAAAAGAG TTGGTAGCTC TTGATCCGGC AAACAAACCA CCGCTGGTAG 5041 CGGTGGTTTT TTTGTTTGCA AGCAGCAGAT TACGCGCAGA AAAAAAGGAT CTCAAGAAGA 5101 TCCTTTGATC TTTTCTACGG GGTCTGACGC TCAGTGGAAC GAAAACTCAC GTTAAGGGAT 5161 TTTGGTCATG AGATTATCAA AAAGGATCTT CACCTAGATC CTTTTAAATT AAAAATGAAG 5221 TTTTAAATCA ATCTAAAGTA TATATGAGTA AACTTGGTCT GACAGTTACC AATGCTTAAT 5281 CAGTGAGGCA CCTATCTCAG CGATCTGTCT ATTTCGTTCA TCCATAGTTG CCTGACTCCC 5341 CGTCGTGTAG ATAACTACGA TACGGGAGGG CTTACCATCT GGCCCCAGTG CTGCAATGAT 5401 ACCGCGAGAC CCACGCTCAC CGGCTCCAGA TTTATCAGCA ATAAACCAGC CAGCCGGAAG 5461 GGCCGAGCGC AGAAGTGGTC CTGCAACTTT ATCCGCCTCC ATCCAGTCTA TTAATTGTTG 5521 CCGGGAAGCT AGAGTAAGTA GTTCGCCAGT TAATAGTTTG CGCAACGTTG TTGCCATTGC 5581 TACAGGCATC GTGGTGTCAC GCTCGTCGTT TGGTATGGCT TCATTCAGCT CCGGTTCCCA 5641 ACGATCAAGG CGAGTTACAT GATCCCCCAT GTTGTGCAAA AAAGCGGTTA GCTCCTTCGG 5701 TCCTCCGATC GTTGTCAGAA GTAAGTTGGC CGCAGTGTTA TCACTCATGG TTATGGCAGC 5761 ACTGCATAAT TCTCTTACTG TCATGCCATC CGTAAGATGC TTTTCTGTGA CTGGTGAGTA 5821 CTCAACCAAG TCATTCTGAG AATAGTGTAT GCGGCGACCG AGTTGCTCTT GCCCGGCGTC 5881 AATACGGGAT AATACCGCGC CACATAGCAG AACTTTAAAA GTGCTCATCA TTGGAAAACG 5941 TTCTTCGGGG CGAAAACTCT CAAGGATCTT ACCGCTGTTG AGATCCAGTT CGATGTAACC 6001 CACTCGTGCA CCCAACTGAT CTTCAGCATC TTTTACTTTC ACCAGCGTTT CTGGGTGAGC 6061 AAAAACAGGA AGGCAAAATG CCGCAAAAAA GGGAATAAGG GCGACACGGA AATGTTGAAT 6121 ACTCATACTC TTCCTTTTTC AATATTATTG AAGCATTTAT CAGGGTTATT GTCTCATGAG 6181 CGGATACATA TTTGAATGTA TTTAGAAAAA TAAACAAATA GGGGTTCCGC GCACATTTCC 6241 CCGAAAAGTG CCACCTGACG TCGGTACCAT TTAAATATCG ATAAGC //