LOCUS pdc_gypsy_330_846 8144 bp ds-DNA linear 26-JUN-2008 DEFINITION ACCESSION pDC_gypsyW KEYWORDS . SOURCE Unknown. ORGANISM Unknown Unclassified. REFERENCE 1 (bases 1 to 8474) AUTHORS Self JOURNAL Unpublished. COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers CDS 236..864 /gene="CMV IE promoter" /label=CMV IE promoter /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#c0c0c0 CDS 830..830 /gene="CMV transcriptional start" /label=CMV transcriptional start /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#c0c0c0 CDS 1935..2445 /gene="gypsy" /label=gypsy /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=pink CDS 864..883 /gene="T7 promoter" /label=T7 promoter /ApEinfo_fwdcolor=#80ffff /ApEinfo_revcolor=#c0c0c0 CDS 881..881 /gene="T7 transcriptional start" /label=T7 transcriptional start /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#c0c0c0 CDS 944..1738 /gene="Kan/Neo" /label=Kan/Neo /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=#c0c0c0 CDS 2446..2450 /gene="gypsy" /label=gypsy(1) /ApEinfo_label=gypsy /ApEinfo_fwdcolor=#c5bac0 /ApEinfo_revcolor=#c0c0c0 CDS 2446..5511 /gene="LacZ" /label=LacZ /ApEinfo_fwdcolor=#8080c0 /ApEinfo_revcolor=#c0c0c0 CDS 5690..5803 /gene="BGH polyA signal" /label=BGH polyA signal /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#c0c0c0 CDS 6036..6065 /gene="lac_promoter" /label=lac_promoter /ApEinfo_fwdcolor=#80ffff /ApEinfo_revcolor=#c0c0c0 CDS 6374..6993 /gene="pBR322 ori" /label=pBR322 ori /ApEinfo_fwdcolor=#ff00ff /ApEinfo_revcolor=#c0c0c0 CDS complement(7148..8008) /gene="beta lactamase" /label=beta lactamase /ApEinfo_fwdcolor=#80ffff /ApEinfo_revcolor=#c0c0c0 ORIGIN 1 GACGGATCGG GAGATCTCCC GATCCCCTAT GGTCGACTCT CAGTACAATC TGCTCTGATG 61 CCGCATAGTT AAGCCAGTAT CTGCTCCCTG CTTGTGTGTT GGAGGTCGCT GAGTAGTGCG 121 CGAGCAAAAT TTAAGCTACA ACAAGGCAAG GCTTGACCGA CAATTGCATG AAGAATCTGC 181 TTAGGGTTAG GCGTTTTGCG CTGCTTCGCG ATGTACGGGC CAGATATACG CGTTGACATT 241 GATTATTGAC TAGTTATTAA TAGTAATCAA TTACGGGGTC ATTAGTTCAT AGCCCATATA 301 TGGAGTTCCG CGTTACATAA CTTACGGTAA ATGGCCCGCC TGGCTGACCG CCCAACGACC 361 CCCGCCCATT GACGTCAATA ATGACGTATG TTCCCATAGT AACGCCAATA GGGACTTTCC 421 ATTGACGTCA ATGGGTGGAC TATTTACGGT AAACTGCCCA CTTGGCAGTA CATCAAGTGT 481 ATCATATGCC AAGTACGCCC CCTATTGACG TCAATGACGG TAAATGGCCC GCCTGGCATT 541 ATGCCCAGTA CATGACCTTA TGGGACTTTC CTACTTGGCA GTACATCTAC GTATTAGTCA 601 TCGCTATTAC CATGGTGATG CGGTTTTGGC AGTACATCAA TGGGCGTGGA TAGCGGTTTG 661 ACTCACGGGG ATTTCCAAGT CTCCACCCCA TTGACGTCAA TGGGAGTTTG TTTTGGCACC 721 AAAATCAACG GGACTTTCCA AAATGTCGTA ACAACTCCGC CCCATTGACG CAAATGGGCG 781 GTAGGCGTGT ACGGTGGGAG GTCTATATAA GCAGAGCTCT CTGGCTAACT AGAGAACCCA 841 CTGCTTAACT GGCTTATCGA AATTAATACG ACTCACTATA GGGAGACCCA AGCTTGATAT 901 CGAATTCCGA TCTGATCAAG AGACAGGATG AGGATCGTTT CGCATGATTG AACAAGATGG 961 ATTGCACGCA GGTTCTCCGG CCGCTTGGGT GGAGAGGCTA TTCGGCTATG ACTGGGCACA 1021 ACAGACAATC GGCTGCTCTG ATGCCGCCGT GTTCCGGCTG TCAGCGCAGG GGCGCCCGGT 1081 TCTTTTTGTC AAGACCGACC TGTCCGGTGC CCTGAATGAA CTGCAGGACG AGGCAGCGCG 1141 GCTATCGTGG CTGGCCACGA CGGGCGTTCC TTGCGCAGCT GTGCTCGACG TTGTCACTGA 1201 AGCGGGAAGG GACTGGCTGC TATTGGGCGA AGTGCCGGGG CAGGATCTCC TGTCATCTCA 1261 CCTTGCTCCT GCCGAGAAAG TATCCATCAT GGCTGATGCA ATGCGGCGGC TGCATACGCT 1321 TGATCCGGCT ACCTGCCCAT TCGACCACCA AGCGAAACAT CGCATCGAGC GAGCACGTAC 1381 TCGGATGGAA GCCGGTCTTG TCGATCAGGA TGATCTGGAC GAAGAGCATC AGGGGCTCGC 1441 GCCAGCCGAA CTGTTCGCCA GGCTCAAGGC GCGCATGCCC GACGGCGAGG ATCTCGTCGT 1501 GACCCATGGC GATGCCTGCT TGCCGAATAT CATGGTGGAA AATGGCCGCT TTTCTGGATT 1561 CATCGACTGT GGCCGGCTGG GTGTGGCGGA CCGCTATCAG GACATAGCGT TGGCTACCCG 1621 TGATATTGCT GAAGAGCTTG GCGGCGAATG GGCTGACCGC TTCCTCGTGC TTTACGGTAT 1681 CGCCGCTCCC GATTCGCAGC GCATCGCCTT CTATCGCCTT CTTGACGAGT TCTTCTGAGC 1741 GGGACTCTGG GGTTCGAAAT GACCGACCAA GCGACGCCCA ACCTGCCATC ACGAGATTTC 1801 GATTCCACCG CCGCCTTCTA TGAAAGGTTG GGCTTCGGAA TCGTTTTCCG GGACGCCGGC 1861 TGGATGATCC TCCAGCGCGG GGATCTCATG CTGGAGTTCT TCGCCCACCC CGGGCTCGAT 1921 CCCCTCGAGC TAGCGTAAGT TTTACAAGAC ACTTCTTTGA CGCAATCAAG AAATTTACGA 1981 GTGAAAAAAA AAAAAAAAAA AAGTTGTGTA TCTGGCCACG TAATAAGTGT GCGTTGAATT 2041 TATTCGCAAA AACATTGCAT ATTTTCGGCA AAGTAAAATT TTGTTGCATA CCTTATCAAA 2101 AAATAAGTGC TGCATACTTT TTAGAGAAAC CAAATAATTT TTTATTGCAT ACCCGTTTTT 2161 AATAAAATAC ATTGCATACC CTCTTTTAAT AAAAAATATT GCATACTTTG ACGAAACAAA 2221 TTTTCGTTGC ATACCCAATA AAAGATTATT ATATTGCATA CCCGTTTTTA ATAAAATACA 2281 TTGCATACCC TCTTTTAATA AAAAATATTG CATACGTTGA CGAAACAAAT TTTCGTTGCA 2341 TACCCAATAA AAGATTATTA TATTGCATAC CTTTTCTTGC CATACCATTT AGCCGATCAA 2401 TTGTGCTCGG CAACAGTATA TTTGTGGTGT GCCAACCAAC AACCAATGAG GCTAGCGGAT 2461 CCCGTCGTTT TACAACGTCG TGACTGGGAA AACCCTGGCG TTACCCAACT TAATCGCCTT 2521 GCAGCACATC CCCCTTTCGC CAGCTGGCGT AATAGCGAAG AGGCCCGCAC CGATCGCCCT 2581 TCCCAACAGT TGCGCAGCCT GAATGGCGAA TGGCGCTTTG CCTGGTTTCC GGCACCAGAA 2641 GCGGTGCCGG AAAGCTGGCT GGAGTGCGAT CTTCCTGAGG CCGATACTGT CGTCGTCCCC 2701 TCAAACTGGC AGATGCACGG TTACGATGCG CCCATCTACA CCAACGTAAC CTATCCCATT 2761 ACGGTCAATC CGCCGTTTGT TCCCACGGAG AATCCGACGG GTTGTTACTC GCTCACATTT 2821 AATGTTGATG AAAGCTGGCT ACAGGAAGGC CAGACGCGAA TTATTTTTGA TGGCGTTAAC 2881 TCGGCGTTTC ATCTGTGGTG CAACGGGCGC TGGGTCGGTT ACGGCCAGGA CAGTCGTTTG 2941 CCGTCTGAAT TTGACCTGAG CGCATTTTTA CGCGCCGGAG AAAACCGCCT CGCGGTGATG 3001 GTGCTGCGTT GGAGTGACGG CAGTTATCTG GAAGATCAGG ATATGTGGCG GATGAGCGGC 3061 ATTTTCCGTG ACGTCTCGTT GCTGCATAAA CCGACTACAC AAATCAGCGA TTTCCATGTT 3121 GCCACTCGCT TTAATGATGA TTTCAGCCGC GCTGTACTGG AGGCTGAAGT TCAGATGTGC 3181 GGCGAGTTGC GTGACTACCT ACGGGTAACA GTTTCTTTAT GGCAGGGTGA AACGCAGGTC 3241 GCCAGCGGCA CCGCGCCTTT CGGCGGTGAA ATTATCGATG AGCGTGGTGG TTATGCCGAT 3301 CGCGTCACAC TACGTCTGAA CGTCGAAAAC CCGAAACTGT GGAGCGCCGA AATCCCGAAT 3361 CTCTATCGTG CGGTGGTTGA ACTGCACACC GCCGACGGCA CGCTGATTGA AGCAGAAGCC 3421 TGCGATGTCG GTTTCCGCGA GGTGCGGATT GAAAATGGTC TGCTGCTGCT GAACGGCAAG 3481 CCGTTGCTGA TTCGAGGCGT TAACCGTCAC GAGCATCATC CTCTGCATGG TCAGGTCATG 3541 GATGAGCAGA CGATGGTGCA GGATATCCTG CTGATGAAGC AGAACAACTT TAACGCCGTG 3601 CGCTGTTCGC ATTATCCGAA CCATCCGCTG TGGTACACGC TGTGCGACCG CTACGGCCTG 3661 TATGTGGTGG ATGAAGCCAA TATTGAAACC CACGGCATGG TGCCAATGAA TCGTCTGACC 3721 GATGATCCGC GCTGGCTACC GGCGATGAGC GAACGCGTAA CGCGAATGGT GCAGCGCGAT 3781 CGTAATCACC CGAGTGTGAT CATCTGGTCG CTGGGGAATG AATCAGGCCA CGGCGCTAAT 3841 CACGACGCGC TGTATCGCTG GATCAAATCT GTCGATCCTT CCCGCCCGGT GCAGTATGAA 3901 GGCGGCGGAG CCGACACCAC GGCCACCGAT ATTATTTGCC CGATGTACGC GCGCGTGGAT 3961 GAAGACCAGC CCTTCCCGGC TGTGCCGAAA TGGTCCATCA AAAAATGGCT TTCGCTACCT 4021 GGAGAGACGC GCCCGCTGAT CCTTTGCGAA TACGCCCACG CGATGGGTAA CAGTCTTGGC 4081 GGTTTCGCTA AATACTGGCA GGCGTTTCGT CAGTATCCCC GTTTACAGGG CGGCTTCGTC 4141 TGGGACTGGG TGGATCAGTC GCTGATTAAA TATGATGAAA ACGGCAACCC GTGGTCGGCT 4201 TACGGCGGTG ATTTTGGCGA TACGCCGAAC GATCGCCAGT TCTGTATGAA CGGTCTGGTC 4261 TTTGCCGACC GCACGCCGCA TCCAGCGCTG ACGGAAGCAA AACACCAGCA GCAGTTTTTC 4321 CAGTTCCGTT TATCCGGGCA AACCATCGAA GTGACCAGCG AATACCTGTT CCGTCAATGC 4381 GATAACGAGC TCCTGCACTG GATGGTGGCG CTGGATGGTA AGCCGCTGGC AAGCGGTGAA 4441 GTGCCTCTGG ATGTCGCTCC ACAAGGTAAA CAGTTGATTG AACTGCCTGA ACTACCGCAG 4501 CCGGAGAGCG CCGGGCAACT CTGGCTCACA GTACGCGTAG TGCAACCGAA CGCGACCGCA 4561 TGGTCAGAAG CCGGGCACAT CAGCGCCTGG CAGCAGTGGC GTCTGGCGGA AAACCTCAGT 4621 GTGACGCTCC CCGCCGCGTC CCACGCCATC CCGCATCTGA CCACCAGCGA AATGGATTTT 4681 TGCATCGAGC TGGGTAATAA GCGTTGGCAA TTTAACCGCC AGTCAGGCTT TCTTTCACAG 4741 ATGTGGATTG GCGATAAAAA ACAACTGCTG ACGCCGCTGC GCGATCAGTT CACCCGTGCA 4801 CCGCTGGATA ACGACATTGG CGTAAGTGAA GCGACCCGCA TTGACCCTAA CGCCTGGGTC 4861 GAACGCTGGA AGGCGGCGGG CCATTACCAG GCCGAAGCAG CGTTGTTGCA GTGCACGGCA 4921 GATACACTTG CTGATGCGGT GCTGATTACG ACCGCTACCG CGTGGCAGCA TCAGGGGAAA 4981 ACCTTATTTA TCAGCCGGAA AACCTACCGG ATTGATGGTA GTGGTCAAAT GGCGATTACC 5041 GTTGATGTTG AAGTGGCGAG CGATACACCG CATCCGGCGC GGATTGGCCT GAACTGCCAG 5101 CTGGCGCAGG TAGCAGAGCG GGTAAACTGG CTCGGATTAG GGCCGCAAGA AAACTATCCC 5161 GACCGCCTTA CTGCCGCCTG TTTTGACCGC TGGGATCTGC CATTGTCAGA CATGTATACC 5221 CCGTACGTCT TCCCGAGCGA AAACGGTCTG CGCTGCGGGA CGCGCGAATT GAATTATGGC 5281 CCACACCAGT GGCGCGGCGA CTTCCAGTTC AACATCAGCC GCTACAGTCA ACAGCAACTG 5341 ATGGAAACCA GCCATCGCCA TCTGCTGGAC GCGGAAGAAG GCACATGGCT GAATATCGAC 5401 GGTTTCCATA TGGGGATTGG TGGCGACGAC TCCTGGAGCC CGTCAGTATC GGCGGAATTC 5461 CAGCTGAGCG CCGGTCGCTC AAATTACCAG TTGGTCTGGT GTCAAAAATA ATAATAACCG 5521 GGCAGGGGGG ATCCGTCGAA GATCAGGTTA TCGATAAAAT AAAAGATTTT ATTTAGTCTC 5581 CAGAAAAAGG GGGGAATGAA AGACCCCACC TGTAGGTTTG GCAAGCTAGT TCTAGAGGGC 5641 CCTATTCTAT AGTGTCACCT AAATGCTAGA GCTCGCTGAT CAGCCTCGAC TGTGCCTTCT 5701 AGTTGCCAGC CATCTGTTGT TTGCCCCTCC CCCGTGCCTT CCTTGACCCT GGAAGGTGCC 5761 ACTCCCACTG TCCTTTCCTA ATAAAATGAG GAAATTGCAT CGCATTGTCT GAGTAGGTGT 5821 CATTCTATTC TGGGGGGTGG GGTGGGGCAG GACAGCAAGG GGGAGGATTG GGAAGACAAT 5881 AGCAGGCATG CTGGGGATGC GGTGGGCTCT ATGGCTTCTG AGGCGGAAAG AACCAGCTGG 5941 GGCTCGAGGG GGATCCCGTC GACCTCGAGA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC 6001 CTGTGTGAAA TTGTTATCCG CTCACAATTC CACACAACAT ACGAGCCGGA AGCATAAAGT 6061 GTAAAGCCTG GGGTGCCTAA TGAGTGAGCT AACTCACATT AATTGCGTTG CGCTCACTGC 6121 CCGCTTTCCA GTCGGGAAAC CTGTCGTGCC AGCTGCATTA ATGAATCGGC CAACGCGCGG 6181 GGAGAGGCGG TTTGCGTATT GGGCGCTCTT CCGCTTCCTC GCTCACTGAC TCGCTGCGCT 6241 CGGTCGTTCG GCTGCGGCGA GCGGTATCAG CTCACTCAAA GGCGGTAATA CGGTTATCCA 6301 CAGAATCAGG GGATAACGCA GGAAAGAACA TGTGAGCAAA AGGCCAGCAA AAGGCCAGGA 6361 ACCGTAAAAA GGCCGCGTTG CTGGCGTTTT TCCATAGGCT CCGCCCCCCT GACGAGCATC 6421 ACAAAAATCG ACGCTCAAGT CAGAGGTGGC GAAACCCGAC AGGACTATAA AGATACCAGG 6481 CGTTTCCCCC TGGAAGCTCC CTCGTGCGCT CTCCTGTTCC GACCCTGCCG CTTACCGGAT 6541 ACCTGTCCGC CTTTCTCCCT TCGGGAAGCG TGGCGCTTTC TCAATGCTCA CGCTGTAGGT 6601 ATCTCAGTTC GGTGTAGGTC GTTCGCTCCA AGCTGGGCTG TGTGCACGAA CCCCCCGTTC 6661 AGCCCGACCG CTGCGCCTTA TCCGGTAACT ATCGTCTTGA GTCCAACCCG GTAAGACACG 6721 ACTTATCGCC ACTGGCAGCA GCCACTGGTA ACAGGATTAG CAGAGCGAGG TATGTAGGCG 6781 GTGCTACAGA GTTCTTGAAG TGGTGGCCTA ACTACGGCTA CACTAGAAGG ACAGTATTTG 6841 GTATCTGCGC TCTGCTGAAG CCAGTTACCT TCGGAAAAAG AGTTGGTAGC TCTTGATCCG 6901 GCAAACAAAC CACCGCTGGT AGCGGTGGTT TTTTTGTTTG CAAGCAGCAG ATTACGCGCA 6961 GAAAAAAAGG ATCTCAAGAA GATCCTTTGA TCTTTTCTAC GGGGTCTGAC GCTCAGTGGA 7021 ACGAAAACTC ACGTTAAGGG ATTTTGGTCA TGAGATTATC AAAAAGGATC TTCACCTAGA 7081 TCCTTTTAAA TTAAAAATGA AGTTTTAAAT CAATCTAAAG TATATATGAG TAAACTTGGT 7141 CTGACAGTTA CCAATGCTTA ATCAGTGAGG CACCTATCTC AGCGATCTGT CTATTTCGTT 7201 CATCCATAGT TGCCTGACTC CCCGTCGTGT AGATAACTAC GATACGGGAG GGCTTACCAT 7261 CTGGCCCCAG TGCTGCAATG ATACCGCGAG ACCCACGCTC ACCGGCTCCA GATTTATCAG 7321 CAATAAACCA GCCAGCCGGA AGGGCCGAGC GCAGAAGTGG TCCTGCAACT TTATCCGCCT 7381 CCATCCAGTC TATTAATTGT TGCCGGGAAG CTAGAGTAAG TAGTTCGCCA GTTAATAGTT 7441 TGCGCAACGT TGTTGCCATT GCTACAGGCA TCGTGGTGTC ACGCTCGTCG TTTGGTATGG 7501 CTTCATTCAG CTCCGGTTCC CAACGATCAA GGCGAGTTAC ATGATCCCCC ATGTTGTGCA 7561 AAAAAGCGGT TAGCTCCTTC GGTCCTCCGA TCGTTGTCAG AAGTAAGTTG GCCGCAGTGT 7621 TATCACTCAT GGTTATGGCA GCACTGCATA ATTCTCTTAC TGTCATGCCA TCCGTAAGAT 7681 GCTTTTCTGT GACTGGTGAG TACTCAACCA AGTCATTCTG AGAATAGTGT ATGCGGCGAC 7741 CGAGTTGCTC TTGCCCGGCG TCAATACGGG ATAATACCGC GCCACATAGC AGAACTTTAA 7801 AAGTGCTCAT CATTGGAAAA CGTTCTTCGG GGCGAAAACT CTCAAGGATC TTACCGCTGT 7861 TGAGATCCAG TTCGATGTAA CCCACTCGTG CACCCAACTG ATCTTCAGCA TCTTTTACTT 7921 TCACCAGCGT TTCTGGGTGA GCAAAAACAG GAAGGCAAAA TGCCGCAAAA AAGGGAATAA 7981 GGGCGACACG GAAATGTTGA ATACTCATAC TCTTCCTTTT TCAATATTAT TGAAGCATTT 8041 ATCAGGGTTA TTGTCTCATG AGCGGATACA TATTTGAATG TATTTAGAAA AATAAACAAA 8101 TAGGGGTTCC GCGCACATTT CCCCGAAAAG TGCCACCTGA CGTC //