LOCUS pdc_gypsy_530_790 7893 bp ds-DNA linear 26-JUN-2008 DEFINITION ACCESSION pDC_gypsyW KEYWORDS . SOURCE Unknown. ORGANISM Unknown Unclassified. REFERENCE 1 (bases 1 to 8474) AUTHORS Self JOURNAL Unpublished. COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers CDS 236..864 /gene="CMV IE promoter" /label=CMV IE promoter /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#c0c0c0 CDS 830..830 /gene="CMV transcriptional start" /label=CMV transcriptional start /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#c0c0c0 CDS 1935..2194 /gene="gypsy" /label=gypsy /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=pink CDS 864..883 /gene="T7 promoter" /label=T7 promoter /ApEinfo_fwdcolor=#80ffff /ApEinfo_revcolor=#c0c0c0 CDS 881..881 /gene="T7 transcriptional start" /label=T7 transcriptional start /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#c0c0c0 CDS 944..1738 /gene="Kan/Neo" /label=Kan/Neo /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=#c0c0c0 CDS 2195..2199 /gene="gypsy" /label=gypsy(1) /ApEinfo_label=gypsy /ApEinfo_fwdcolor=#c5bac0 /ApEinfo_revcolor=#c0c0c0 CDS 2195..5260 /gene="LacZ" /label=LacZ /ApEinfo_fwdcolor=#8080c0 /ApEinfo_revcolor=#c0c0c0 CDS 5439..5552 /gene="BGH polyA signal" /label=BGH polyA signal /ApEinfo_fwdcolor=#808040 /ApEinfo_revcolor=#c0c0c0 CDS 5785..5814 /gene="lac_promoter" /label=lac_promoter /ApEinfo_fwdcolor=#80ffff /ApEinfo_revcolor=#c0c0c0 CDS 6123..6742 /gene="pBR322 ori" /label=pBR322 ori /ApEinfo_fwdcolor=#ff00ff /ApEinfo_revcolor=#c0c0c0 CDS complement(6897..7757) /gene="beta lactamase" /label=beta lactamase /ApEinfo_fwdcolor=#80ffff /ApEinfo_revcolor=#c0c0c0 ORIGIN 1 GACGGATCGG GAGATCTCCC GATCCCCTAT GGTCGACTCT CAGTACAATC TGCTCTGATG 61 CCGCATAGTT AAGCCAGTAT CTGCTCCCTG CTTGTGTGTT GGAGGTCGCT GAGTAGTGCG 121 CGAGCAAAAT TTAAGCTACA ACAAGGCAAG GCTTGACCGA CAATTGCATG AAGAATCTGC 181 TTAGGGTTAG GCGTTTTGCG CTGCTTCGCG ATGTACGGGC CAGATATACG CGTTGACATT 241 GATTATTGAC TAGTTATTAA TAGTAATCAA TTACGGGGTC ATTAGTTCAT AGCCCATATA 301 TGGAGTTCCG CGTTACATAA CTTACGGTAA ATGGCCCGCC TGGCTGACCG CCCAACGACC 361 CCCGCCCATT GACGTCAATA ATGACGTATG TTCCCATAGT AACGCCAATA GGGACTTTCC 421 ATTGACGTCA ATGGGTGGAC TATTTACGGT AAACTGCCCA CTTGGCAGTA CATCAAGTGT 481 ATCATATGCC AAGTACGCCC CCTATTGACG TCAATGACGG TAAATGGCCC GCCTGGCATT 541 ATGCCCAGTA CATGACCTTA TGGGACTTTC CTACTTGGCA GTACATCTAC GTATTAGTCA 601 TCGCTATTAC CATGGTGATG CGGTTTTGGC AGTACATCAA TGGGCGTGGA TAGCGGTTTG 661 ACTCACGGGG ATTTCCAAGT CTCCACCCCA TTGACGTCAA TGGGAGTTTG TTTTGGCACC 721 AAAATCAACG GGACTTTCCA AAATGTCGTA ACAACTCCGC CCCATTGACG CAAATGGGCG 781 GTAGGCGTGT ACGGTGGGAG GTCTATATAA GCAGAGCTCT CTGGCTAACT AGAGAACCCA 841 CTGCTTAACT GGCTTATCGA AATTAATACG ACTCACTATA GGGAGACCCA AGCTTGATAT 901 CGAATTCCGA TCTGATCAAG AGACAGGATG AGGATCGTTT CGCATGATTG AACAAGATGG 961 ATTGCACGCA GGTTCTCCGG CCGCTTGGGT GGAGAGGCTA TTCGGCTATG ACTGGGCACA 1021 ACAGACAATC GGCTGCTCTG ATGCCGCCGT GTTCCGGCTG TCAGCGCAGG GGCGCCCGGT 1081 TCTTTTTGTC AAGACCGACC TGTCCGGTGC CCTGAATGAA CTGCAGGACG AGGCAGCGCG 1141 GCTATCGTGG CTGGCCACGA CGGGCGTTCC TTGCGCAGCT GTGCTCGACG TTGTCACTGA 1201 AGCGGGAAGG GACTGGCTGC TATTGGGCGA AGTGCCGGGG CAGGATCTCC TGTCATCTCA 1261 CCTTGCTCCT GCCGAGAAAG TATCCATCAT GGCTGATGCA ATGCGGCGGC TGCATACGCT 1321 TGATCCGGCT ACCTGCCCAT TCGACCACCA AGCGAAACAT CGCATCGAGC GAGCACGTAC 1381 TCGGATGGAA GCCGGTCTTG TCGATCAGGA TGATCTGGAC GAAGAGCATC AGGGGCTCGC 1441 GCCAGCCGAA CTGTTCGCCA GGCTCAAGGC GCGCATGCCC GACGGCGAGG ATCTCGTCGT 1501 GACCCATGGC GATGCCTGCT TGCCGAATAT CATGGTGGAA AATGGCCGCT TTTCTGGATT 1561 CATCGACTGT GGCCGGCTGG GTGTGGCGGA CCGCTATCAG GACATAGCGT TGGCTACCCG 1621 TGATATTGCT GAAGAGCTTG GCGGCGAATG GGCTGACCGC TTCCTCGTGC TTTACGGTAT 1681 CGCCGCTCCC GATTCGCAGC GCATCGCCTT CTATCGCCTT CTTGACGAGT TCTTCTGAGC 1741 GGGACTCTGG GGTTCGAAAT GACCGACCAA GCGACGCCCA ACCTGCCATC ACGAGATTTC 1801 GATTCCACCG CCGCCTTCTA TGAAAGGTTG GGCTTCGGAA TCGTTTTCCG GGACGCCGGC 1861 TGGATGATCC TCCAGCGCGG GGATCTCATG CTGGAGTTCT TCGCCCACCC CGGGCTCGAT 1921 CCCCTCGAGC TAGCATAATT TTTTATTGCA TACCCGTTTT TAATAAAATA CATTGCATAC 1981 CCTCTTTTAA TAAAAAATAT TGCATACTTT GACGAAACAA ATTTTCGTTG CATACCCAAT 2041 AAAAGATTAT TATATTGCAT ACCCGTTTTT AATAAAATAC ATTGCATACC CTCTTTTAAT 2101 AAAAAATATT GCATACGTTG ACGAAACAAA TTTTCGTTGC ATACCCAATA AAAGATTATT 2161 ATATTGCATA CCTTTTCTTG CCATACCATT TAGCATGAGG CTAGCGGATC CCGTCGTTTT 2221 ACAACGTCGT GACTGGGAAA ACCCTGGCGT TACCCAACTT AATCGCCTTG CAGCACATCC 2281 CCCTTTCGCC AGCTGGCGTA ATAGCGAAGA GGCCCGCACC GATCGCCCTT CCCAACAGTT 2341 GCGCAGCCTG AATGGCGAAT GGCGCTTTGC CTGGTTTCCG GCACCAGAAG CGGTGCCGGA 2401 AAGCTGGCTG GAGTGCGATC TTCCTGAGGC CGATACTGTC GTCGTCCCCT CAAACTGGCA 2461 GATGCACGGT TACGATGCGC CCATCTACAC CAACGTAACC TATCCCATTA CGGTCAATCC 2521 GCCGTTTGTT CCCACGGAGA ATCCGACGGG TTGTTACTCG CTCACATTTA ATGTTGATGA 2581 AAGCTGGCTA CAGGAAGGCC AGACGCGAAT TATTTTTGAT GGCGTTAACT CGGCGTTTCA 2641 TCTGTGGTGC AACGGGCGCT GGGTCGGTTA CGGCCAGGAC AGTCGTTTGC CGTCTGAATT 2701 TGACCTGAGC GCATTTTTAC GCGCCGGAGA AAACCGCCTC GCGGTGATGG TGCTGCGTTG 2761 GAGTGACGGC AGTTATCTGG AAGATCAGGA TATGTGGCGG ATGAGCGGCA TTTTCCGTGA 2821 CGTCTCGTTG CTGCATAAAC CGACTACACA AATCAGCGAT TTCCATGTTG CCACTCGCTT 2881 TAATGATGAT TTCAGCCGCG CTGTACTGGA GGCTGAAGTT CAGATGTGCG GCGAGTTGCG 2941 TGACTACCTA CGGGTAACAG TTTCTTTATG GCAGGGTGAA ACGCAGGTCG CCAGCGGCAC 3001 CGCGCCTTTC GGCGGTGAAA TTATCGATGA GCGTGGTGGT TATGCCGATC GCGTCACACT 3061 ACGTCTGAAC GTCGAAAACC CGAAACTGTG GAGCGCCGAA ATCCCGAATC TCTATCGTGC 3121 GGTGGTTGAA CTGCACACCG CCGACGGCAC GCTGATTGAA GCAGAAGCCT GCGATGTCGG 3181 TTTCCGCGAG GTGCGGATTG AAAATGGTCT GCTGCTGCTG AACGGCAAGC CGTTGCTGAT 3241 TCGAGGCGTT AACCGTCACG AGCATCATCC TCTGCATGGT CAGGTCATGG ATGAGCAGAC 3301 GATGGTGCAG GATATCCTGC TGATGAAGCA GAACAACTTT AACGCCGTGC GCTGTTCGCA 3361 TTATCCGAAC CATCCGCTGT GGTACACGCT GTGCGACCGC TACGGCCTGT ATGTGGTGGA 3421 TGAAGCCAAT ATTGAAACCC ACGGCATGGT GCCAATGAAT CGTCTGACCG ATGATCCGCG 3481 CTGGCTACCG GCGATGAGCG AACGCGTAAC GCGAATGGTG CAGCGCGATC GTAATCACCC 3541 GAGTGTGATC ATCTGGTCGC TGGGGAATGA ATCAGGCCAC GGCGCTAATC ACGACGCGCT 3601 GTATCGCTGG ATCAAATCTG TCGATCCTTC CCGCCCGGTG CAGTATGAAG GCGGCGGAGC 3661 CGACACCACG GCCACCGATA TTATTTGCCC GATGTACGCG CGCGTGGATG AAGACCAGCC 3721 CTTCCCGGCT GTGCCGAAAT GGTCCATCAA AAAATGGCTT TCGCTACCTG GAGAGACGCG 3781 CCCGCTGATC CTTTGCGAAT ACGCCCACGC GATGGGTAAC AGTCTTGGCG GTTTCGCTAA 3841 ATACTGGCAG GCGTTTCGTC AGTATCCCCG TTTACAGGGC GGCTTCGTCT GGGACTGGGT 3901 GGATCAGTCG CTGATTAAAT ATGATGAAAA CGGCAACCCG TGGTCGGCTT ACGGCGGTGA 3961 TTTTGGCGAT ACGCCGAACG ATCGCCAGTT CTGTATGAAC GGTCTGGTCT TTGCCGACCG 4021 CACGCCGCAT CCAGCGCTGA CGGAAGCAAA ACACCAGCAG CAGTTTTTCC AGTTCCGTTT 4081 ATCCGGGCAA ACCATCGAAG TGACCAGCGA ATACCTGTTC CGTCAATGCG ATAACGAGCT 4141 CCTGCACTGG ATGGTGGCGC TGGATGGTAA GCCGCTGGCA AGCGGTGAAG TGCCTCTGGA 4201 TGTCGCTCCA CAAGGTAAAC AGTTGATTGA ACTGCCTGAA CTACCGCAGC CGGAGAGCGC 4261 CGGGCAACTC TGGCTCACAG TACGCGTAGT GCAACCGAAC GCGACCGCAT GGTCAGAAGC 4321 CGGGCACATC AGCGCCTGGC AGCAGTGGCG TCTGGCGGAA AACCTCAGTG TGACGCTCCC 4381 CGCCGCGTCC CACGCCATCC CGCATCTGAC CACCAGCGAA ATGGATTTTT GCATCGAGCT 4441 GGGTAATAAG CGTTGGCAAT TTAACCGCCA GTCAGGCTTT CTTTCACAGA TGTGGATTGG 4501 CGATAAAAAA CAACTGCTGA CGCCGCTGCG CGATCAGTTC ACCCGTGCAC CGCTGGATAA 4561 CGACATTGGC GTAAGTGAAG CGACCCGCAT TGACCCTAAC GCCTGGGTCG AACGCTGGAA 4621 GGCGGCGGGC CATTACCAGG CCGAAGCAGC GTTGTTGCAG TGCACGGCAG ATACACTTGC 4681 TGATGCGGTG CTGATTACGA CCGCTACCGC GTGGCAGCAT CAGGGGAAAA CCTTATTTAT 4741 CAGCCGGAAA ACCTACCGGA TTGATGGTAG TGGTCAAATG GCGATTACCG TTGATGTTGA 4801 AGTGGCGAGC GATACACCGC ATCCGGCGCG GATTGGCCTG AACTGCCAGC TGGCGCAGGT 4861 AGCAGAGCGG GTAAACTGGC TCGGATTAGG GCCGCAAGAA AACTATCCCG ACCGCCTTAC 4921 TGCCGCCTGT TTTGACCGCT GGGATCTGCC ATTGTCAGAC ATGTATACCC CGTACGTCTT 4981 CCCGAGCGAA AACGGTCTGC GCTGCGGGAC GCGCGAATTG AATTATGGCC CACACCAGTG 5041 GCGCGGCGAC TTCCAGTTCA ACATCAGCCG CTACAGTCAA CAGCAACTGA TGGAAACCAG 5101 CCATCGCCAT CTGCTGGACG CGGAAGAAGG CACATGGCTG AATATCGACG GTTTCCATAT 5161 GGGGATTGGT GGCGACGACT CCTGGAGCCC GTCAGTATCG GCGGAATTCC AGCTGAGCGC 5221 CGGTCGCTCA AATTACCAGT TGGTCTGGTG TCAAAAATAA TAATAACCGG GCAGGGGGGA 5281 TCCGTCGAAG ATCAGGTTAT CGATAAAATA AAAGATTTTA TTTAGTCTCC AGAAAAAGGG 5341 GGGAATGAAA GACCCCACCT GTAGGTTTGG CAAGCTAGTT CTAGAGGGCC CTATTCTATA 5401 GTGTCACCTA AATGCTAGAG CTCGCTGATC AGCCTCGACT GTGCCTTCTA GTTGCCAGCC 5461 ATCTGTTGTT TGCCCCTCCC CCGTGCCTTC CTTGACCCTG GAAGGTGCCA CTCCCACTGT 5521 CCTTTCCTAA TAAAATGAGG AAATTGCATC GCATTGTCTG AGTAGGTGTC ATTCTATTCT 5581 GGGGGGTGGG GTGGGGCAGG ACAGCAAGGG GGAGGATTGG GAAGACAATA GCAGGCATGC 5641 TGGGGATGCG GTGGGCTCTA TGGCTTCTGA GGCGGAAAGA ACCAGCTGGG GCTCGAGGGG 5701 GATCCCGTCG ACCTCGAGAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAT 5761 TGTTATCCGC TCACAATTCC ACACAACATA CGAGCCGGAA GCATAAAGTG TAAAGCCTGG 5821 GGTGCCTAAT GAGTGAGCTA ACTCACATTA ATTGCGTTGC GCTCACTGCC CGCTTTCCAG 5881 TCGGGAAACC TGTCGTGCCA GCTGCATTAA TGAATCGGCC AACGCGCGGG GAGAGGCGGT 5941 TTGCGTATTG GGCGCTCTTC CGCTTCCTCG CTCACTGACT CGCTGCGCTC GGTCGTTCGG 6001 CTGCGGCGAG CGGTATCAGC TCACTCAAAG GCGGTAATAC GGTTATCCAC AGAATCAGGG 6061 GATAACGCAG GAAAGAACAT GTGAGCAAAA GGCCAGCAAA AGGCCAGGAA CCGTAAAAAG 6121 GCCGCGTTGC TGGCGTTTTT CCATAGGCTC CGCCCCCCTG ACGAGCATCA CAAAAATCGA 6181 CGCTCAAGTC AGAGGTGGCG AAACCCGACA GGACTATAAA GATACCAGGC GTTTCCCCCT 6241 GGAAGCTCCC TCGTGCGCTC TCCTGTTCCG ACCCTGCCGC TTACCGGATA CCTGTCCGCC 6301 TTTCTCCCTT CGGGAAGCGT GGCGCTTTCT CAATGCTCAC GCTGTAGGTA TCTCAGTTCG 6361 GTGTAGGTCG TTCGCTCCAA GCTGGGCTGT GTGCACGAAC CCCCCGTTCA GCCCGACCGC 6421 TGCGCCTTAT CCGGTAACTA TCGTCTTGAG TCCAACCCGG TAAGACACGA CTTATCGCCA 6481 CTGGCAGCAG CCACTGGTAA CAGGATTAGC AGAGCGAGGT ATGTAGGCGG TGCTACAGAG 6541 TTCTTGAAGT GGTGGCCTAA CTACGGCTAC ACTAGAAGGA CAGTATTTGG TATCTGCGCT 6601 CTGCTGAAGC CAGTTACCTT CGGAAAAAGA GTTGGTAGCT CTTGATCCGG CAAACAAACC 6661 ACCGCTGGTA GCGGTGGTTT TTTTGTTTGC AAGCAGCAGA TTACGCGCAG AAAAAAAGGA 6721 TCTCAAGAAG ATCCTTTGAT CTTTTCTACG GGGTCTGACG CTCAGTGGAA CGAAAACTCA 6781 CGTTAAGGGA TTTTGGTCAT GAGATTATCA AAAAGGATCT TCACCTAGAT CCTTTTAAAT 6841 TAAAAATGAA GTTTTAAATC AATCTAAAGT ATATATGAGT AAACTTGGTC TGACAGTTAC 6901 CAATGCTTAA TCAGTGAGGC ACCTATCTCA GCGATCTGTC TATTTCGTTC ATCCATAGTT 6961 GCCTGACTCC CCGTCGTGTA GATAACTACG ATACGGGAGG GCTTACCATC TGGCCCCAGT 7021 GCTGCAATGA TACCGCGAGA CCCACGCTCA CCGGCTCCAG ATTTATCAGC AATAAACCAG 7081 CCAGCCGGAA GGGCCGAGCG CAGAAGTGGT CCTGCAACTT TATCCGCCTC CATCCAGTCT 7141 ATTAATTGTT GCCGGGAAGC TAGAGTAAGT AGTTCGCCAG TTAATAGTTT GCGCAACGTT 7201 GTTGCCATTG CTACAGGCAT CGTGGTGTCA CGCTCGTCGT TTGGTATGGC TTCATTCAGC 7261 TCCGGTTCCC AACGATCAAG GCGAGTTACA TGATCCCCCA TGTTGTGCAA AAAAGCGGTT 7321 AGCTCCTTCG GTCCTCCGAT CGTTGTCAGA AGTAAGTTGG CCGCAGTGTT ATCACTCATG 7381 GTTATGGCAG CACTGCATAA TTCTCTTACT GTCATGCCAT CCGTAAGATG CTTTTCTGTG 7441 ACTGGTGAGT ACTCAACCAA GTCATTCTGA GAATAGTGTA TGCGGCGACC GAGTTGCTCT 7501 TGCCCGGCGT CAATACGGGA TAATACCGCG CCACATAGCA GAACTTTAAA AGTGCTCATC 7561 ATTGGAAAAC GTTCTTCGGG GCGAAAACTC TCAAGGATCT TACCGCTGTT GAGATCCAGT 7621 TCGATGTAAC CCACTCGTGC ACCCAACTGA TCTTCAGCAT CTTTTACTTT CACCAGCGTT 7681 TCTGGGTGAG CAAAAACAGG AAGGCAAAAT GCCGCAAAAA AGGGAATAAG GGCGACACGG 7741 AAATGTTGAA TACTCATACT CTTCCTTTTT CAATATTATT GAAGCATTTA TCAGGGTTAT 7801 TGTCTCATGA GCGGATACAT ATTTGAATGT ATTTAGAAAA ATAAACAAAT AGGGGTTCCG 7861 CGCACATTTC CCCGAAAAGT GCCACCTGAC GTC //