LOCUS        hCP_alphabeta_GUS        2458 bp ds-DNA   linear       25-AUG-2009
DEFINITION  .
ACCESSION   
VERSION     
SOURCE      .
  ORGANISM  .
COMMENT     
COMMENT     ApEinfo:methylated:1
FEATURES             Location/Qualifiers
     CDS             77..153
                     /function="transport protein"
                     /note="ORF3"
                     /codon_start=1
                     /product="29K"
                     /protein_id="CAA82560.1"
                     /db_xref="GI:488715"
                     /db_xref="GOA:Q88605"
                     /db_xref="InterPro:IPR001022"
                     /db_xref="UniProtKB/TrEMBL:Q88605"
                     /translation="MSIVSYEPKVSDFLNLSKKEEILPKALTRLKTVSISTKDIISVK
                     ESETLCDIDLLINVPLDKYRYVGILGAVFTGEWLVPDFVKGGVTISVIDKRLANSKEC
                     VIGTYRAAAKSKRFQFKLVPNYFVSTVDAKRKPWQVHVRIQDLKIEAGWQPLALEVVS
                     VAMVTNNVVMKGLREKVVAINDPDVEGFEGVVDEFVDSVAAFKAVDNFKRRKKKVEEK
                     GVVSKYKYRPEKYAGPDSFNLKEENVLQHYKPESVPVFRSGVGRAHSDA"
                     /label=MP, 29K
                     /ApEinfo_fwdcolor=#c6ffbf
                     /ApEinfo_revcolor=#c6ffbf
     CDS             77..550
                     /function="coat protein"
                     /note="ORF4"
                     /codon_start=1
                     /product="18K"
                     /protein_id="CAA82561.1"
                     /db_xref="GI:488716"
                     /db_xref="GOA:Q88606"
                     /db_xref="HSSP:P03580"
                     /db_xref="InterPro:IPR001337"
                     /db_xref="UniProtKB/TrEMBL:Q88606"
                     /translation="MSYNITNPNQYQYFAAVWAEPIPMLNQCISALSQSYQTQAARDT
                     VRQQFSNLLSAVVAPSQRFPETGSRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESR
                     PSASEVRNATQRVDDATVSIRSQIQLLLSELSSGHGYMNRAEFEALVPWTTAAAT"
                     /label=CP, 18K
                     /ApEinfo_fwdcolor=#00ff00
                     /ApEinfo_revcolor=#00ff00
     misc_feature    complement(640..645)
                     /label=SalI
                     /ApEinfo_fwdcolor=#ff0000
                     /ApEinfo_revcolor=#ff0000
     misc_feature    280..284
                     /label=SmaI
                     /ApEinfo_fwdcolor=#ff0006
                     /ApEinfo_revcolor=#ff0006
     misc_feature    complement(551..556)
                     /label=HindIII
                     /ApEinfo_fwdcolor=#ff0000
                     /ApEinfo_revcolor=#ff0000
     misc_feature    647..2458
                     /label=GUS
                     /ApEinfo_fwdcolor=#00ff00
                     /ApEinfo_revcolor=green
     misc_feature    complement(645..650)
                     /label=NcoI
                     /ApEinfo_fwdcolor=#ff0000
                     /ApEinfo_revcolor=#ff0000
     misc_feature    complement(1..76)
                     /label=hairpin
                     /ApEinfo_fwdcolor=cyan
                     /ApEinfo_revcolor=cyan
     misc_feature    complement(557..639)
                     /label=2-84 of PVX (M72416)
                     /ApEinfo_fwdcolor=cyan
                     /ApEinfo_revcolor=cyan
     misc_feature    71..76
                     /label=KpnI
                     /ApEinfo_fwdcolor=#ff0000
                     /ApEinfo_revcolor=#ff0000
ORIGIN
        1 gggcgaattg ggtaccgggc cccccctcga ggtcgacggt atcgataccg tcgacctcga
       61 gggggggccc ggtaccATGT CTTACAACAT TACAAACCCG AATCAGTACC AGTATTTCGC
      121 AGCGGTGTGG GCAGAGCCCA TTCCGATGCT TAACCAGTGC ATATCGGCAT TGTCACAATC
      181 GTACCAAACA CAAGCTGCGA GAGACACTGT TAGACAGCAA TTCTCAAACT TGTTGAGTGC
      241 GGTTGTGGCT CCGAGCCAGC GGTTCCCAGA AACAGGGTCC CGGGTGTATG TTAACTCGGC
      301 TGTTATAAAG CCGTTGTACG AGGCTCTTAT GAAGTCCTTT GATACTAGAA ATAGGATCAT
      361 AGAGACGGAA GAGGAGTCAC GCCCGTCAGC TTCCGAAGTA CGTAACGCGA CACAACGTGT
      421 TGATGATGCG ACCGTTTCCA TTAGAAGTCA AATTCAGCTG TTGCTGAGCG AGCTTTCCAG
      481 TGGACATGGT TATATGAACA GGGCAGAGTT CGAGGCTTTG GTGCCATGGA CTACTGCTGC
      541 TGCTACTTAG aagcttttgt tagacttact tttccaagcg ggtgtgtaac aattgggcgt
      601 ggtgggtttg gttgtgttgt tggtgtatgg tttagttttg tcgaccATGG TCCGTCCTGT
      661 AGAAACCCCA ACCCGTGAAA TCAAAAAACT CGACGGCCTG TGGGCATTCA GTCTGGATCG
      721 CGAAAACTGT GGAATTGATC AGCGTTGGTG GGAAAGCGCG TTACAAGAAA GCCGGGCAAT
      781 TGCTGTGCCA GGCAGTTTTA ACGATCAGTT CGCCGATGCA GATATTCGTA ATTATGCGGG
      841 CAACGTCTGG TATCAGCGCG AAGTCTTTAT ACCGAAAGGT TGGGCAGGCC AGCGTATCGT
      901 GCTGCGTTTC GATGCGGTCA CTCATTACGG CAAAGTGTGG GTCAATAATC AGGAAGTGAT
      961 GGAGCATCAG GGCGGCTATA CGCCATTTGA AGCCGATGTC ACGCCGTATG TTATTGCCGG
     1021 GAAAAGTGTA CGTATCACCG TTTGTGTGAA CAACGAACTG AACTGGCAGA CTATCCCGCC
     1081 GGGAATGGTG ATTACCGACG AAAACGGCAA GAAAAAGCAG TCTTACTTCC ATGATTTCTT
     1141 TAACTATGCC GGAATCCATC GCAGCGTAAT GCTCTACACC ACGCCGAACA CCTGGGTGGA
     1201 CGATATCACC GTGGTGACGC ATGTCGCGCA AGACTGTAAC CACGCGTCTG TTGACTGGCA
     1261 GGTGGTGGCC AATGGTGATG TCAGCGTTGA ACTGCGTGAT GCGGATCAAC AGGTGGTTGC
     1321 AACTGGACAA GGCACTAGCG GGACTTTGCA AGTGGTGAAT CCGCACCTCT GGCAACCGGG
     1381 TGAAGGTTAT CTCTATGAAC TGTGCGTCAC AGCCAAAAGC CAGACAGAGT GTGATATCTA
     1441 CCCGCTTCGC GTCGGCATCC GGTCAGTGGC AGTGAAGGGC GAACAGTTCC TGATTAACCA
     1501 CAAACCGTTC TACTTTACTG GCTTTGGTCG TCATGAAGAT GCGGACTTAC GTGGCAAAGG
     1561 ATTCGATAAC GTGCTGATGG TGCACGACCA CGCATTAATG GACTGGATTG GGGCCAACTC
     1621 CTACCGTACC TCGCATTACC CTTACGCTGA AGAGATGCTC GACTGGGCAG ATGAACATGG
     1681 CATCGTGGTG ATTGATGAAA CTGCTGCTGT CGGCTTTAAC CTCTCTTTAG GCATTGGTTT
     1741 CGAAGCGGGC AACAAGCCGA AAGAACTGTA CAGCGAAGAG GCAGTCAACG GGGAAACTCA
     1801 GCAAGCGCAC TTACAGGCGA TTAAAGAGCT GATAGCGCGT GACAAAAACC ACCCAAGCGT
     1861 GGTGATGTGG AGTATTGCCA ACGAACCGGA TACCCGTCCG CAAGGTGCAC GGGAATATTT
     1921 CGCGCCACTG GCGGAAGCAA CGCGTAAACT CGACCCGACG CGTCCGATCA CCTGCGTCAA
     1981 TGTAATGTTC TGCGACGCTC ACACCGATAC CATCAGCGAT CTCTTTGATG TGCTGTGCCT
     2041 GAACCGTTAT TACGGATGGT ATGTCCAAAG CGGCGATTTG GAAACGGCAG AGAAGGTACT
     2101 GGAAAAAGAA CTTCTGGCCT GGCAGGAGAA ACTGCATCAG CCGATTATCA TCACCGAATA
     2161 CGGCGTGGAT ACGTTAGCCG GGCTGCACTC AATGTACACC GACATGTGGA GTGAAGAGTA
     2221 TCAGTGTGCA TGGCTGGATA TGTATCACCG CGTCTTTGAT CGCGTCAGCG CCGTCGTCGG
     2281 TGAACAGGTA TGGAATTTCG CCGATTTTGC GACCTCGCAA GGCATATTGC GCGTTGGCGG
     2341 TAACAAGAAA GGGATCTTCA CTCGCGACCG CAAACCGAAG TCGGCGGCTT TTCTGCTGCA
     2401 AAAACGCTGG ACTGGCATGA ACTTCGGTGA AAAACCGCAG CAGGGAGGCA AACAATGA
//