 |
IRESite: The database of experimentally verified IRES structures |  |
| Home | Browse | Search | Documentation | Literature | Annotated plasmid flatfiles | Data submission | About | Login | User: guest |
|
||||||||||||||||||||
|
| IRESite Id | IRES name | IRES functional status | IRES overlaps with promoter | Gene/virus name | IRES from gene | Plasmid name | Record type |
IRES Seq Id | IRES Struct Id | 2D Struct Id | IRES found in |
Translated in |
Transl. method |
mRNA topol. | O R F # |
Alternat. translat. init. | ORF frame- shift |
Transl. read- through |
mRNA size [nt] | IRES size [nt] | mRNA origin | IRES origin in eng. mRNA |
| 110 | Apaf-1 | unclear | Apaf-1 | natur... | 1130 | 43 | 42 | Homo sapiens | linear | 1 | no | 0 | no | 4475 | 231 | nuclear | ||||||
| 342 | Apaf-1 | not tested | Apaf-1 | natur... | 1129 | Mus musculus | linear | 1 | not ... | 0 | no | 5152 | 583 | nuclear | ||||||||
| 631 | Apaf-1 | functional | not tested | Apaf-1 | pbetaGAL/Apaf1/CAT | plasm... | 1999 | Homo sapiens | 1xCricetul... | 1xin vivo 5xin vivo |
linear | 2 | not ... | 0 0 |
no no |
6004 | 580 | nuclear | ||||
| 344 | Apaf-1 | functional | not tested | Apaf-1 | phpRAF | plasm... | 1124 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3716 | 575 | nuclear | ||||
| 345 | Apaf-1 | functional | not tested | Apaf-1 | phpRMmAF | plasm... | 1129 | Mus musculus | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3724 | 583 | nuclear | ||||
| 341 | Apaf-1 | functional | not tested | Apaf-1 | pRAF | plasm... | 1124 | Homo sapiens | 6xHomo sap... | 6xin vivo | linear | 2 | not ... | 0 0 |
no no |
3662 | 575 | nuclear | ||||
| 343 | Apaf-1 | functional | not tested | Apaf-1 | pRMmAF | plasm... | 1129 | Mus musculus | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3670 | 583 | nuclear | ||||
| 418 | Apaf-1_-112/-3 | defective | not tested | Apaf-1 | -115/1 | plasm... | 1355 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3013 | 110 | nuclear | ||||
| 419 | Apaf-1_-235/-3 | defective | not tested | Apaf-1 | -233/1 | plasm... | 1358 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3319 | 233 | nuclear | ||||
| 420 | Apaf-1_-328/-3 | defective | not tested | Apaf-1 | -330/1 | plasm... | 1447 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3414 | 328 | nuclear | ||||
| 421 | Apaf-1_-462/-3 | defective | not tested | Apaf-1 | -464/1 | plasm... | 1364 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3538 | 460 | nuclear | ||||
| 423 | Apaf-1_-576/-117 | defective | not tested | Apaf-1 | -578/-115 | plasm... | 1370 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3547 | 460 | nuclear | ||||
| 422 | Apaf-1_-576/-61 | functional | not tested | Apaf-1 | -578/-60 | plasm... | 1367 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3603 | 516 | nuclear | ||||
| 424 | Apaf-1_-577/-232 | defective | not tested | Apaf-1 | -578/-233 | plasm... | 1373 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3432 | 346 | nuclear | ||||
| 425 | Apaf-1_-577/-329 | defective | not tested | Apaf-1 | -578/-330 | plasm... | 1376 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
yes no |
3335 | 249 | nuclear | ||||
| 426 | Apaf-1_-577/-459 | defective | not tested | Apaf-1 | -578/-464 | plasm... | 1379 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3224 | 119 | nuclear | ||||
| 417 | Apaf-1_-58/-3 | defective | not tested | Apaf-1 | -60/1 | plasm... | 1352 | Homo sapiens | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
3134 | 56 | nuclear | ||||
| 595 | rc_Apaf-1 | defective | not tested | Apaf-1 | pbetaGAL/rc_Apaf1/CAT | plasm... | 1995 | Homo sapiens | linear | 2 | not ... | 0 0 |
no no |
6004 | 580 | nuclear |