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IRESite: The database of experimentally verified IRES structures |  |
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| IRESite Id | IRES name | IRES functional status | IRES overlaps with promoter | Gene/virus name | IRES from gene | Plasmid name | Record type |
IRES Seq Id | IRES Struct Id | 2D Struct Id | IRES found in |
Translated in |
Transl. method |
mRNA topol. | O R F # |
Alternat. translat. init. | ORF frame- shift |
Transl. read- through |
mRNA size [nt] | IRES size [nt] | mRNA origin | IRES origin in eng. mRNA |
| 39 | crTMV_IREScp crTMV_IRESmp75 crTMV_IRESmp228 |
not tested | crTMV | natur... | 1949 1950 1951 |
Crucifer t... | linear | 4 | no yes no no |
0 0 0 0 |
yes no no no |
6312 | 146 75 228 |
viral | ||||||||
| 602 | crTMV_IREScp | not tested | crTMV | natur... | 1922 | Crucifer t... | linear | 1 | not ... | 0 | no | 1511 | 148 | viral | ||||||||
| 603 | crTMV_IREScp | not tested | crTMV | natur... | 1924 | Crucifer t... | linear | 1 | not ... | 0 | no | 882 | 148 | viral | ||||||||
| 605 | crTMV_IREScp | functional | not tested | crTMV | H-CP-IREScp-GUS | plasm... | 1924 | Crucifer t... | 1xwheat ge... | 1xin vitro 1xin vitro |
linear | 2 | not ... | 0 0 |
no no |
2541 | 148 | viral | ||||
| 609 | crTMV_IREScp | functional | not tested | crTMV | H-GFP-IREScp-GUS | plasm... | 1924 | Crucifer t... | 1xrabbit r... | 1xin vitro 1xin vitro 1xin vivo |
linear | 2 | not ... | 0 0 |
no no |
2709 | 148 | viral | ||||
| 606 | crTMV_IRESmp75 | functional | not tested | crTMV | H-CP-crTMV_IRESmp75-GUS | plasm... | 1943 | Crucifer t... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
2441 | 73 | viral | ||||
| 610 | crTMV_IRESmp75 | functional | not tested | crTMV | H-GFP-crTMV_IRESmp75-GUS | plasm... | 1943 | Crucifer t... | 1xrabbit r... | 1xin vitro 1xin vitro 1xin vivo |
linear | 2 | not ... | 0 0 |
no no |
2609 | 73 | viral |