IRESite_Id:521 negative control plasmid hp-pbetaGAL/CAT

IRESite: The database of experimentally verified IRES structures

The nucleic acid data:

IRESite Id: `521`	Version: `3`
Originaly submitted by: Václav Vopálenský
Reviewed by: Martin Mokrejš	Last change: `2009-09-02 23:18:04`

IRESite record type:

negative_control_plasmid_with_promoter_and_without_putative_IRES

The shape of the nucleic acid molecule translated:
linear The quality of the mRNA/+RNA sequence:
hopefully_full-length_mRNA

The mRNA/+RNA description:

Putative in vivo CMV promoter-derived transcript produced from bicistronic plasmid hp-pbetaGAL/CAT which
comprises beta galactosidase and chloramphenicol acetyltransferase as the first and the second cistron,
respectively with a hairpin structure in front of the first cistron.
The sequence ends at its 3'-end right after the poly(A) signal from BGH mRNA and thus the 3'-UTR might be
slightly wrong.

The mRNA/+RNA sequence represented in the +DNA notation:

agagaaccca ctgcttactg gcttatcgaa attaatacga ctcactatag ggagacccaa gcttggtacc ccggccggcc ggccggccgg ccaaaggccg 
^1         ^11        ^21        ^31        ^41        ^51        ^61        ^71        ^81        ^91        

gccggccggc cggccggcta gcggtacggt accgagctcg gatccactag taacggccgc cagtgtgctg gaattctgca gatatccatc acactggcgg 
^101       ^111       ^121       ^131       ^141       ^151       ^161       ^171       ^181       ^191       

ccgcaattcc cggggatcga aagagcctgc taaagcaaaa aagaagtcac catgtcgttt actttgacca acaagaacgt gattttcgtt gccggtctgg 
^201       ^211       ^221       ^231       ^241       ^251       ^261       ^271       ^281       ^291       

gaggcattgg tctggacacc agcaaggagc tgctcaagcg cgatcccgtc gttttacaac gtcgtgactg ggaaaaccct ggcgttaccc aacttaatcg 
^301       ^311       ^321       ^331       ^341       ^351       ^361       ^371       ^381       ^391       

ccttgcagca catccccctt tcgccagctg gcgtaatagc gaagaggccc gcaccgatcg cccttcccaa cagttgcgca gcctgaatgg cgaatggcgc 
^401       ^411       ^421       ^431       ^441       ^451       ^461       ^471       ^481       ^491       

tttgcctggt ttccggcacc agaagcggtg ccggaaagct ggctggagtg cgatcttcct gaggccgata ctgtcgtcgt cccctcaaac tggcagatgc 
^501       ^511       ^521       ^531       ^541       ^551       ^561       ^571       ^581       ^591       

acggttacga tgcgcccatc tacaccaacg taacctatcc cattacggtc aatccgccgt ttgttcccac ggagaatccg acgggttgtt actcgctcac 
^601       ^611       ^621       ^631       ^641       ^651       ^661       ^671       ^681       ^691       

atttaatgtt gatgaaagct ggctacagga aggccagacg cgaattattt ttgatggcgt taactcggcg tttcatctgt ggtgcaacgg gcgctgggtc 
^701       ^711       ^721       ^731       ^741       ^751       ^761       ^771       ^781       ^791       

ggttacggcc aggacagtcg tttgccgtct gaatttgacc tgagcgcatt tttacgcgcc ggagaaaacc gcctcgcggt gatggtgctg cgttggagtg 
^801       ^811       ^821       ^831       ^841       ^851       ^861       ^871       ^881       ^891       

acggcagtta tctggaagat caggatatgt ggcggatgag cggcattttc cgtgacgtct cgttgctgca taaaccgact acacaaatca gcgatttcca 
^901       ^911       ^921       ^931       ^941       ^951       ^961       ^971       ^981       ^991       

tgttgccact cgctttaatg atgatttcag ccgcgctgta ctggaggctg aagttcagat gtgcggcgag ttgcgtgact acctacgggt aacagtttct 
^1001      ^1011      ^1021      ^1031      ^1041      ^1051      ^1061      ^1071      ^1081      ^1091      

ttatggcagg gtgaaacgca ggtcgccagc ggcaccgcgc ctttcggcgg tgaaattatc gatgagcgtg gtggttatgc cgatcgcgtc acactacgtc 
^1101      ^1111      ^1121      ^1131      ^1141      ^1151      ^1161      ^1171      ^1181      ^1191      

tgaacgtcga aaacccgaaa ctgtggagcg ccgaaatccc gaatctctat cgtgcggtgg ttgaactgca caccgccgac ggcacgctga ttgaagcaga 
^1201      ^1211      ^1221      ^1231      ^1241      ^1251      ^1261      ^1271      ^1281      ^1291      

agcctgcgat gtcggtttcc gcgaggtgcg gattgaaaat ggtctgctgc tgctgaacgg caagccgttg ctgattcgag gcgttaaccg tcacgagcat 
^1301      ^1311      ^1321      ^1331      ^1341      ^1351      ^1361      ^1371      ^1381      ^1391      

catcctctgc atggtcaggt catggatgag cagacgatgg tgcaggatat cctgctgatg aagcagaaca actttaacgc cgtgcgctgt tcgcattatc 
^1401      ^1411      ^1421      ^1431      ^1441      ^1451      ^1461      ^1471      ^1481      ^1491      

cgaaccatcc gctgtggtac acgctgtgcg accgctacgg cctgtatgtg gtggatgaag ccaatattga aacccacggc atggtgccaa tgaatcgtct 
^1501      ^1511      ^1521      ^1531      ^1541      ^1551      ^1561      ^1571      ^1581      ^1591      

gaccgatgat ccgcgctggc taccggcgat gagcgaacgc gtaacgcgaa tggtgcagcg cgatcgtaat cacccgagtg tgatcatctg gtcgctgggg 
^1601      ^1611      ^1621      ^1631      ^1641      ^1651      ^1661      ^1671      ^1681      ^1691      

aatgaatcag gccacggcgc taatcacgac gcgctgtatc gctggatcaa atctgtcgat ccttcccgcc cggtgcagta tgaaggcggc ggagccgaca 
^1701      ^1711      ^1721      ^1731      ^1741      ^1751      ^1761      ^1771      ^1781      ^1791      

ccacggccac cgatattatt tgcccgatgt acgcgcgcgt ggatgaagac cagcccttcc cggctgtgcc gaaatggtcc atcaaaaaat ggctttcgct 
^1801      ^1811      ^1821      ^1831      ^1841      ^1851      ^1861      ^1871      ^1881      ^1891      

acctggagag acgcgcccgc tgatcctttg cgaatacgcc cacgcgatgg gtaacagtct tggcggtttc gctaaatact ggcaggcgtt tcgtcagtat 
^1901      ^1911      ^1921      ^1931      ^1941      ^1951      ^1961      ^1971      ^1981      ^1991      

ccccgtttac agggcggctt cgtctgggac tgggtggatc agtcgctgat taaatatgat gaaaacggca acccgtggtc ggcttacggc ggtgattttg 
^2001      ^2011      ^2021      ^2031      ^2041      ^2051      ^2061      ^2071      ^2081      ^2091      

gcgatacgcc gaacgatcgc cagttctgta tgaacggtct ggtctttgcc gaccgcacgc cgcatccagc gctgacggaa gcaaaacacc agcagcagtt 
^2101      ^2111      ^2121      ^2131      ^2141      ^2151      ^2161      ^2171      ^2181      ^2191      

tttccagttc cgtttatccg ggcaaaccat cgaagtgacc agcgaatacc tgttccgtca tagcgataac gagctcctgc actggatggt ggcgctggat 
^2201      ^2211      ^2221      ^2231      ^2241      ^2251      ^2261      ^2271      ^2281      ^2291      

ggtaagccgc tggcaagcgg tgaagtgcct ctggatgtcg ctccacaagg taaacagttg attgaactgc ctgaactacc gcagccggag agcgccgggc 
^2301      ^2311      ^2321      ^2331      ^2341      ^2351      ^2361      ^2371      ^2381      ^2391      

aactctggct cacagtacgc gtagtgcaac cgaacgcgac cgcatggtca gaagccgggc acatcagcgc ctggcagcag tggcgtctgg cggaaaacct 
^2401      ^2411      ^2421      ^2431      ^2441      ^2451      ^2461      ^2471      ^2481      ^2491      

cagtgtgacg ctccccgccg cgtcccacgc catcccgcat ctgaccacca gcgaaatgga tttttgcatc gagctgggta ataagcgttg gcaatttaac 
^2501      ^2511      ^2521      ^2531      ^2541      ^2551      ^2561      ^2571      ^2581      ^2591      

cgccagtcag gctttctttc acagatgtgg attggcgata aaaaacaact gctgacgccg ctgcgcgatc agttcacccg tgcaccgctg gataacgaca 
^2601      ^2611      ^2621      ^2631      ^2641      ^2651      ^2661      ^2671      ^2681      ^2691      

ttggcgtaag tgaagcgacc cgcattgacc ctaacgcctg ggtcgaacgc tggaaggcgg cgggccatta ccaggccgaa gcagcgttgt tgcagtgcac 
^2701      ^2711      ^2721      ^2731      ^2741      ^2751      ^2761      ^2771      ^2781      ^2791      

ggcagataca cttgctgatg cggtgctgat tacgaccgct cacgcgtggc agcatcaggg gaaaacctta tttatcagcc ggaaaaccta ccggattgat 
^2801      ^2811      ^2821      ^2831      ^2841      ^2851      ^2861      ^2871      ^2881      ^2891      

ggtagtggtc aaatggcgat taccgttgat gttgaagtgg cgagcgatac accgcatccg gcgcggattg gcctgaactg ccagctggcg caggtagcag 
^2901      ^2911      ^2921      ^2931      ^2941      ^2951      ^2961      ^2971      ^2981      ^2991      

agcgggtaaa ctggctcgga ttagggccgc aagaaaacta tcccgaccgc cttactgccg cctgttttga ccgctgggat ctgccattgt cagacatgta 
^3001      ^3011      ^3021      ^3031      ^3041      ^3051      ^3061      ^3071      ^3081      ^3091      

taccccgtac gtcttcccga gcgaaaacgg tctgcgctgc gggacgcgcg aattgaatta tggcccacac cagtggcgcg gcgacttcca gttcaacatc 
^3101      ^3111      ^3121      ^3131      ^3141      ^3151      ^3161      ^3171      ^3181      ^3191      

agccgctaca gtcaacagca actgatggaa accagccatc gccatctgct gcacgcggaa gaaggcacat ggctgaatat cgacggtttc catatgggga 
^3201      ^3211      ^3221      ^3231      ^3241      ^3251      ^3261      ^3271      ^3281      ^3291      

ttggtggcga cgactcctgg agcccgtcag tatcggcgga attacagctg agcgccggtc gctaccatta ccagttggtc tggtgtcaaa aataataata 
^3301      ^3311      ^3321      ^3331      ^3341      ^3351      ^3361      ^3371      ^3381      ^3391      

accgggcagg ccatgtctgc ccgtatttcg cgtaaggaaa tccattatgt actatttaaa aaacacaaac ttttggatgt tcggtttatt ctttttcttt 
^3401      ^3411      ^3421      ^3431      ^3441      ^3451      ^3461      ^3471      ^3481      ^3491      

tactttttta tcatgggagc ctacttcccg tttttcccga tttggctaca tgacatcaac catatcagca aaagtgatac gggtattatt tttgccgcta 
^3501      ^3511      ^3521      ^3531      ^3541      ^3551      ^3561      ^3571      ^3581      ^3591      

tttctctgtt ctcgctatta ttccaaccgc tgtttggtct gctttctgac aaactcggcc tcgactctag gcggccgcct cgagctagag gatctgagct 
^3601      ^3611      ^3621      ^3631      ^3641      ^3651      ^3661      ^3671      ^3681      ^3691      

tggcgagatt ttcaggagct aaggaagcta aaatggagaa aaaaatcact ggatatacca ccgttgatat atcccaatgg catcgtaaag aacattttga 
^3701      ^3711      ^3721      ^3731      ^3741      ^3751      ^3761      ^3771      ^3781      ^3791      

ggcatttcag tcagttgctc aatgtaccta taaccagacc gttcagctgg atattacggc ctttttaaag accgtaaaga aaaataagca caagttttat 
^3801      ^3811      ^3821      ^3831      ^3841      ^3851      ^3861      ^3871      ^3881      ^3891      

ccggccttta ttcacattct tgcccgcctg atgaatgctc atccggaatt ccgtatggca atgaaagacg gtgagctggt gatatgggat agtgttcacc 
^3901      ^3911      ^3921      ^3931      ^3941      ^3951      ^3961      ^3971      ^3981      ^3991      

cttgttacac cgttttccat gagcaaactg aaacgttttc atcgctctgg agtgaatacc acgacgattt ccggcagttt ctacacatat attcgcaaga 
^4001      ^4011      ^4021      ^4031      ^4041      ^4051      ^4061      ^4071      ^4081      ^4091      

tgtggcgtgt tacggtgaaa acctggccta tttccctaaa gggtttattg agaatatgtt tttcgtctca gccaatccct gggtgagttt caccagtttt 
^4101      ^4111      ^4121      ^4131      ^4141      ^4151      ^4161      ^4171      ^4181      ^4191      

gatttaaacg tggccaatat ggacaacttc ttcgcccccg ttttcaccat gggcaaatat tatacgcaag gcgacaaggt gctgatgccg ctggcgattc 
^4201      ^4211      ^4221      ^4231      ^4241      ^4251      ^4261      ^4271      ^4281      ^4291      

aggttcatca tgccgtctgt gatggcttcc atgtcggcag aatgcttaat gaattacaac agtactgcga tgagtggcag ggcggggcgt aattttttta 
^4301      ^4311      ^4321      ^4331      ^4341      ^4351      ^4361      ^4371      ^4381      ^4391      

aggcagttat tggtgccctt aaacgcctgg tgctacgcct gaataagtga taataagcgg atgaatggca gaaattcgcc ggatctttgt gaaggaacct 
^4401      ^4411      ^4421      ^4431      ^4441      ^4451      ^4461      ^4471      ^4481      ^4491      

tacttctgtg gtgtgacata attggacaaa ctacctacag agatttaaag ctctaaggta aatataaaat ttttaagtgt ataatgtgtt aaactactga 
^4501      ^4511      ^4521      ^4531      ^4541      ^4551      ^4561      ^4571      ^4581      ^4591      

ttctaattgt ttgtgtattt tagattccaa cctatggaac tgatgaatgg gagcagtggt ggaatgcctt taatgaggaa aacctgtttt gctcagaaga 
^4601      ^4611      ^4621      ^4631      ^4641      ^4651      ^4661      ^4671      ^4681      ^4691      

aatgccatct agtgatgatg aggctactgc tgactctcaa cattctactc ctccaaaaaa gaagagaaag gtagaagacc ccaaggactt tccttcagaa 
^4701      ^4711      ^4721      ^4731      ^4741      ^4751      ^4761      ^4771      ^4781      ^4791      

ttgctaagtt ttttgagtca tgctgtgttt agtaatagaa ctcttgcttg ctttgctatt tacaccacaa aggaaaaagc tgcactgcta tacaagaaaa 
^4801      ^4811      ^4821      ^4831      ^4841      ^4851      ^4861      ^4871      ^4881      ^4891      

ttatggaaaa atattctgta acctttataa gtaggcataa cagttataat cataacatac tgttttttct tactccacac aggcatagag tgtctgctat 
^4901      ^4911      ^4921      ^4931      ^4941      ^4951      ^4961      ^4971      ^4981      ^4991      

taataactat gctcaaaaat tgtgtacctt tagcttttta atttgtaaag gggttaataa ggaatatttg atgtatagtg ccttgactag agatcataat 
^5001      ^5011      ^5021      ^5031      ^5041      ^5051      ^5061      ^5071      ^5081      ^5091      

cagccatacc acatttgtag aggttttact tgctttaaaa aacctcccac acctccccct gaacctgaaa cataaaatga atgcaattgt tgttgttaac 
^5101      ^5111      ^5121      ^5131      ^5141      ^5151      ^5161      ^5171      ^5181      ^5191      

ttgtttattg cagcttataa tggttacaaa taaagcaata gcatcacaaa tttcacaaat aaagcatttt tttcactgca ttctagttgt ggtttgtcca 
^5201      ^5211      ^5221      ^5231      ^5241      ^5251      ^5261      ^5271      ^5281      ^5291      

aactcatcaa tgtatcttat catgtctgcc tagagggccc tattctatag tgtcacctaa atgctagagc tcgctgatca gcctcgactg tgccttctag 
^5301      ^5311      ^5321      ^5331      ^5341      ^5351      ^5361      ^5371      ^5381      ^5391      

ttgccagcca tctgttgttt gcccctcccc cgtgccttcc ttgaccctgg aaggtgccac tcccactgtc ctttcctaat aa
^5401      ^5411      ^5421      ^5431      ^5441      ^5451      ^5461      ^5471      ^5481

Credibility of mRNA sequence:

end-to-end_sequence_reverse_engineered_and_should_match_experiment

The name of the plasmid:
hp-pbetaGAL/CAT The name of the promoter used to express this mRNA:
CMV

Description of the plasmid (facultative for promoter-less plasmid records):
Plasmid containing beta galactosidase and chloramphenicol acetyltransferase reporter genes. A synthetic DNA fragment was inserted into the bicistronic constructs to introduce a stable stem loop structure 72 nt downstream from CMV transcription start site.

The in vivo produced transcripts are heterogeneous (due to any of promoter?/splicing?/cleavage?/breakage?):

not tested

The in vivo produced heterogeneous transcripts occur due to alternative splicing:

not tested

The DNA sequence of the plasmid in (+) orientation annotated by its secondary structure:

cggatacata tttgaatgta tttagaaaaa taaacaaata ggggttccgc gcacatttcc ccgaaaagtg ccacctgacg tcgacggatc gggagatctc 
^1         ^11        ^21        ^31        ^41        ^51        ^61        ^71        ^81        ^91        

ccgatcccct atggtcgact ctcagtacaa tctgctctga tgccgcatag ttaagccagt atctgctccc tgcttgtgtg ttggaggtcg ctgagtagtg 
^101       ^111       ^121       ^131       ^141       ^151       ^161       ^171       ^181       ^191       

cgcgagcaaa atttaagcta caacaaggca aggcttgacc gacaattgca tgaagaatct gcttagggtt aggcgttttg cgctgcttcg cgatgtacgg 
^201       ^211       ^221       ^231       ^241       ^251       ^261       ^271       ^281       ^291       

gccagatata cgcgttgaca ttgattattg actagttatt aatagtaatc aattacgggg tcattagttc atagcccata tatggagttc cgcgttacat 
^301       ^311       ^321       ^331       ^341       ^351       ^361       ^371       ^381       ^391       

aacttacggt aaatggcccg cctggctgac cgcccaacga cccccgccca ttgacgtcaa taatgacgta tgttcccata gtaacgccaa tagggacttt 
^401       ^411       ^421       ^431       ^441       ^451       ^461       ^471       ^481       ^491       

ccattgacgt caatgggtgg actatttacg gtaaactgcc cacttggcag tacatcaagt gtatcatatg ccaagtacgc cccctattga cgtcaatgac 
^501       ^511       ^521       ^531       ^541       ^551       ^561       ^571       ^581       ^591       

ggtaaatggc ccgcctggca ttatgcccag tacatgacct tatgggactt tcctacttgg cagtacatct acgtattagt catcgctatt accatggtga 
^601       ^611       ^621       ^631       ^641       ^651       ^661       ^671       ^681       ^691       

tgcggttttg gcagtacatc aatgggcgtg gatagcggtt tgactcacgg ggatttccaa gtctccaccc cattgacgtc aatgggagtt tgttttggca 
^701       ^711       ^721       ^731       ^741       ^751       ^761       ^771       ^781       ^791       

ccaaaatcaa cgggactttc caaaatgtcg taacaactcc gccccattga cgcaaatggg cggtaggcgt gtacggtggg aggtctatat aagcagagct 
^801       ^811       ^821       ^831       ^841       ^851       ^861       ^871       ^881       ^891       

ctctggctaa ctagagaacc cactgcttac tggcttatcg aaattaatac gactcactat agggagaccc aagcttggta ccccggccgg ccggccggcc 
^901       ^911       ^921       ^931       ^941       ^951       ^961       ^971       ^981       ^991       

ggccaaaggc cggccggccg gccggccggc tagcggtacg gtaccgagct cggatccact agtaacggcc gccagtgtgc tggaattctg cagatatcca 
^1001      ^1011      ^1021      ^1031      ^1041      ^1051      ^1061      ^1071      ^1081      ^1091      

tcacactggc ggccgcaatt cccggggatc gaaagagcct gctaaagcaa aaaagaagtc accatgtcgt ttactttgac caacaagaac gtgattttcg 
^1101      ^1111      ^1121      ^1131      ^1141      ^1151      ^1161      ^1171      ^1181      ^1191      

ttgccggtct gggaggcatt ggtctggaca ccagcaagga gctgctcaag cgcgatcccg tcgttttaca acgtcgtgac tgggaaaacc ctggcgttac 
^1201      ^1211      ^1221      ^1231      ^1241      ^1251      ^1261      ^1271      ^1281      ^1291      

ccaacttaat cgccttgcag cacatccccc tttcgccagc tggcgtaata gcgaagaggc ccgcaccgat cgcccttccc aacagttgcg cagcctgaat 
^1301      ^1311      ^1321      ^1331      ^1341      ^1351      ^1361      ^1371      ^1381      ^1391      

ggcgaatggc gctttgcctg gtttccggca ccagaagcgg tgccggaaag ctggctggag tgcgatcttc ctgaggccga tactgtcgtc gtcccctcaa 
^1401      ^1411      ^1421      ^1431      ^1441      ^1451      ^1461      ^1471      ^1481      ^1491      

actggcagat gcacggttac gatgcgccca tctacaccaa cgtaacctat cccattacgg tcaatccgcc gtttgttccc acggagaatc cgacgggttg 
^1501      ^1511      ^1521      ^1531      ^1541      ^1551      ^1561      ^1571      ^1581      ^1591      

ttactcgctc acatttaatg ttgatgaaag ctggctacag gaaggccaga cgcgaattat ttttgatggc gttaactcgg cgtttcatct gtggtgcaac 
^1601      ^1611      ^1621      ^1631      ^1641      ^1651      ^1661      ^1671      ^1681      ^1691      

gggcgctggg tcggttacgg ccaggacagt cgtttgccgt ctgaatttga cctgagcgca tttttacgcg ccggagaaaa ccgcctcgcg gtgatggtgc 
^1701      ^1711      ^1721      ^1731      ^1741      ^1751      ^1761      ^1771      ^1781      ^1791      

tgcgttggag tgacggcagt tatctggaag atcaggatat gtggcggatg agcggcattt tccgtgacgt ctcgttgctg cataaaccga ctacacaaat 
^1801      ^1811      ^1821      ^1831      ^1841      ^1851      ^1861      ^1871      ^1881      ^1891      

cagcgatttc catgttgcca ctcgctttaa tgatgatttc agccgcgctg tactggaggc tgaagttcag atgtgcggcg agttgcgtga ctacctacgg 
^1901      ^1911      ^1921      ^1931      ^1941      ^1951      ^1961      ^1971      ^1981      ^1991      

gtaacagttt ctttatggca gggtgaaacg caggtcgcca gcggcaccgc gcctttcggc ggtgaaatta tcgatgagcg tggtggttat gccgatcgcg 
^2001      ^2011      ^2021      ^2031      ^2041      ^2051      ^2061      ^2071      ^2081      ^2091      

tcacactacg tctgaacgtc gaaaacccga aactgtggag cgccgaaatc ccgaatctct atcgtgcggt ggttgaactg cacaccgccg acggcacgct 
^2101      ^2111      ^2121      ^2131      ^2141      ^2151      ^2161      ^2171      ^2181      ^2191      

gattgaagca gaagcctgcg atgtcggttt ccgcgaggtg cggattgaaa atggtctgct gctgctgaac ggcaagccgt tgctgattcg aggcgttaac 
^2201      ^2211      ^2221      ^2231      ^2241      ^2251      ^2261      ^2271      ^2281      ^2291      

cgtcacgagc atcatcctct gcatggtcag gtcatggatg agcagacgat ggtgcaggat atcctgctga tgaagcagaa caactttaac gccgtgcgct 
^2301      ^2311      ^2321      ^2331      ^2341      ^2351      ^2361      ^2371      ^2381      ^2391      

gttcgcatta tccgaaccat ccgctgtggt acacgctgtg cgaccgctac ggcctgtatg tggtggatga agccaatatt gaaacccacg gcatggtgcc 
^2401      ^2411      ^2421      ^2431      ^2441      ^2451      ^2461      ^2471      ^2481      ^2491      

aatgaatcgt ctgaccgatg atccgcgctg gctaccggcg atgagcgaac gcgtaacgcg aatggtgcag cgcgatcgta atcacccgag tgtgatcatc 
^2501      ^2511      ^2521      ^2531      ^2541      ^2551      ^2561      ^2571      ^2581      ^2591      

tggtcgctgg ggaatgaatc aggccacggc gctaatcacg acgcgctgta tcgctggatc aaatctgtcg atccttcccg cccggtgcag tatgaaggcg 
^2601      ^2611      ^2621      ^2631      ^2641      ^2651      ^2661      ^2671      ^2681      ^2691      

gcggagccga caccacggcc accgatatta tttgcccgat gtacgcgcgc gtggatgaag accagccctt cccggctgtg ccgaaatggt ccatcaaaaa 
^2701      ^2711      ^2721      ^2731      ^2741      ^2751      ^2761      ^2771      ^2781      ^2791      

atggctttcg ctacctggag agacgcgccc gctgatcctt tgcgaatacg cccacgcgat gggtaacagt cttggcggtt tcgctaaata ctggcaggcg 
^2801      ^2811      ^2821      ^2831      ^2841      ^2851      ^2861      ^2871      ^2881      ^2891      

tttcgtcagt atccccgttt acagggcggc ttcgtctggg actgggtgga tcagtcgctg attaaatatg atgaaaacgg caacccgtgg tcggcttacg 
^2901      ^2911      ^2921      ^2931      ^2941      ^2951      ^2961      ^2971      ^2981      ^2991      

gcggtgattt tggcgatacg ccgaacgatc gccagttctg tatgaacggt ctggtctttg ccgaccgcac gccgcatcca gcgctgacgg aagcaaaaca 
^3001      ^3011      ^3021      ^3031      ^3041      ^3051      ^3061      ^3071      ^3081      ^3091      

ccagcagcag tttttccagt tccgtttatc cgggcaaacc atcgaagtga ccagcgaata cctgttccgt catagcgata acgagctcct gcactggatg 
^3101      ^3111      ^3121      ^3131      ^3141      ^3151      ^3161      ^3171      ^3181      ^3191      

gtggcgctgg atggtaagcc gctggcaagc ggtgaagtgc ctctggatgt cgctccacaa ggtaaacagt tgattgaact gcctgaacta ccgcagccgg 
^3201      ^3211      ^3221      ^3231      ^3241      ^3251      ^3261      ^3271      ^3281      ^3291      

agagcgccgg gcaactctgg ctcacagtac gcgtagtgca accgaacgcg accgcatggt cagaagccgg gcacatcagc gcctggcagc agtggcgtct 
^3301      ^3311      ^3321      ^3331      ^3341      ^3351      ^3361      ^3371      ^3381      ^3391      

ggcggaaaac ctcagtgtga cgctccccgc cgcgtcccac gccatcccgc atctgaccac cagcgaaatg gatttttgca tcgagctggg taataagcgt 
^3401      ^3411      ^3421      ^3431      ^3441      ^3451      ^3461      ^3471      ^3481      ^3491      

tggcaattta accgccagtc aggctttctt tcacagatgt ggattggcga taaaaaacaa ctgctgacgc cgctgcgcga tcagttcacc cgtgcaccgc 
^3501      ^3511      ^3521      ^3531      ^3541      ^3551      ^3561      ^3571      ^3581      ^3591      

tggataacga cattggcgta agtgaagcga cccgcattga ccctaacgcc tgggtcgaac gctggaaggc ggcgggccat taccaggccg aagcagcgtt 
^3601      ^3611      ^3621      ^3631      ^3641      ^3651      ^3661      ^3671      ^3681      ^3691      

gttgcagtgc acggcagata cacttgctga tgcggtgctg attacgaccg ctcacgcgtg gcagcatcag gggaaaacct tatttatcag ccggaaaacc 
^3701      ^3711      ^3721      ^3731      ^3741      ^3751      ^3761      ^3771      ^3781      ^3791      

taccggattg atggtagtgg tcaaatggcg attaccgttg atgttgaagt ggcgagcgat acaccgcatc cggcgcggat tggcctgaac tgccagctgg 
^3801      ^3811      ^3821      ^3831      ^3841      ^3851      ^3861      ^3871      ^3881      ^3891      

cgcaggtagc agagcgggta aactggctcg gattagggcc gcaagaaaac tatcccgacc gccttactgc cgcctgtttt gaccgctggg atctgccatt 
^3901      ^3911      ^3921      ^3931      ^3941      ^3951      ^3961      ^3971      ^3981      ^3991      

gtcagacatg tataccccgt acgtcttccc gagcgaaaac ggtctgcgct gcgggacgcg cgaattgaat tatggcccac accagtggcg cggcgacttc 
^4001      ^4011      ^4021      ^4031      ^4041      ^4051      ^4061      ^4071      ^4081      ^4091      

cagttcaaca tcagccgcta cagtcaacag caactgatgg aaaccagcca tcgccatctg ctgcacgcgg aagaaggcac atggctgaat atcgacggtt 
^4101      ^4111      ^4121      ^4131      ^4141      ^4151      ^4161      ^4171      ^4181      ^4191      

tccatatggg gattggtggc gacgactcct ggagcccgtc agtatcggcg gaattacagc tgagcgccgg tcgctaccat taccagttgg tctggtgtca 
^4201      ^4211      ^4221      ^4231      ^4241      ^4251      ^4261      ^4271      ^4281      ^4291      

aaaataataa taaccgggca ggccatgtct gcccgtattt cgcgtaagga aatccattat gtactattta aaaaacacaa acttttggat gttcggttta 
^4301      ^4311      ^4321      ^4331      ^4341      ^4351      ^4361      ^4371      ^4381      ^4391      

ttctttttct tttacttttt tatcatggga gcctacttcc cgtttttccc gatttggcta catgacatca accatatcag caaaagtgat acgggtatta 
^4401      ^4411      ^4421      ^4431      ^4441      ^4451      ^4461      ^4471      ^4481      ^4491      

tttttgccgc tatttctctg ttctcgctat tattccaacc gctgtttggt ctgctttctg acaaactcgg cctcgactct aggcggccgc ctcgagctag 
^4501      ^4511      ^4521      ^4531      ^4541      ^4551      ^4561      ^4571      ^4581      ^4591      

aggatctgag cttggcgaga ttttcaggag ctaaggaagc taaaatggag aaaaaaatca ctggatatac caccgttgat atatcccaat ggcatcgtaa 
^4601      ^4611      ^4621      ^4631      ^4641      ^4651      ^4661      ^4671      ^4681      ^4691      

agaacatttt gaggcatttc agtcagttgc tcaatgtacc tataaccaga ccgttcagct ggatattacg gcctttttaa agaccgtaaa gaaaaataag 
^4701      ^4711      ^4721      ^4731      ^4741      ^4751      ^4761      ^4771      ^4781      ^4791      

cacaagtttt atccggcctt tattcacatt cttgcccgcc tgatgaatgc tcatccggaa ttccgtatgg caatgaaaga cggtgagctg gtgatatggg 
^4801      ^4811      ^4821      ^4831      ^4841      ^4851      ^4861      ^4871      ^4881      ^4891      

atagtgttca cccttgttac accgttttcc atgagcaaac tgaaacgttt tcatcgctct ggagtgaata ccacgacgat ttccggcagt ttctacacat 
^4901      ^4911      ^4921      ^4931      ^4941      ^4951      ^4961      ^4971      ^4981      ^4991      

atattcgcaa gatgtggcgt gttacggtga aaacctggcc tatttcccta aagggtttat tgagaatatg tttttcgtct cagccaatcc ctgggtgagt 
^5001      ^5011      ^5021      ^5031      ^5041      ^5051      ^5061      ^5071      ^5081      ^5091      

ttcaccagtt ttgatttaaa cgtggccaat atggacaact tcttcgcccc cgttttcacc atgggcaaat attatacgca aggcgacaag gtgctgatgc 
^5101      ^5111      ^5121      ^5131      ^5141      ^5151      ^5161      ^5171      ^5181      ^5191      

cgctggcgat tcaggttcat catgccgtct gtgatggctt ccatgtcggc agaatgctta atgaattaca acagtactgc gatgagtggc agggcggggc 
^5201      ^5211      ^5221      ^5231      ^5241      ^5251      ^5261      ^5271      ^5281      ^5291      

gtaatttttt taaggcagtt attggtgccc ttaaacgcct ggtgctacgc ctgaataagt gataataagc ggatgaatgg cagaaattcg ccggatcttt 
^5301      ^5311      ^5321      ^5331      ^5341      ^5351      ^5361      ^5371      ^5381      ^5391      

gtgaaggaac cttacttctg tggtgtgaca taattggaca aactacctac agagatttaa agctctaagg taaatataaa atttttaagt gtataatgtg 
^5401      ^5411      ^5421      ^5431      ^5441      ^5451      ^5461      ^5471      ^5481      ^5491      

ttaaactact gattctaatt gtttgtgtat tttagattcc aacctatgga actgatgaat gggagcagtg gtggaatgcc tttaatgagg aaaacctgtt 
^5501      ^5511      ^5521      ^5531      ^5541      ^5551      ^5561      ^5571      ^5581      ^5591      

ttgctcagaa gaaatgccat ctagtgatga tgaggctact gctgactctc aacattctac tcctccaaaa aagaagagaa aggtagaaga ccccaaggac 
^5601      ^5611      ^5621      ^5631      ^5641      ^5651      ^5661      ^5671      ^5681      ^5691      

tttccttcag aattgctaag ttttttgagt catgctgtgt ttagtaatag aactcttgct tgctttgcta tttacaccac aaaggaaaaa gctgcactgc 
^5701      ^5711      ^5721      ^5731      ^5741      ^5751      ^5761      ^5771      ^5781      ^5791      

tatacaagaa aattatggaa aaatattctg taacctttat aagtaggcat aacagttata atcataacat actgtttttt cttactccac acaggcatag 
^5801      ^5811      ^5821      ^5831      ^5841      ^5851      ^5861      ^5871      ^5881      ^5891      

agtgtctgct attaataact atgctcaaaa attgtgtacc tttagctttt taatttgtaa aggggttaat aaggaatatt tgatgtatag tgccttgact 
^5901      ^5911      ^5921      ^5931      ^5941      ^5951      ^5961      ^5971      ^5981      ^5991      

agagatcata atcagccata ccacatttgt agaggtttta cttgctttaa aaaacctccc acacctcccc ctgaacctga aacataaaat gaatgcaatt 
^6001      ^6011      ^6021      ^6031      ^6041      ^6051      ^6061      ^6071      ^6081      ^6091      

gttgttgtta acttgtttat tgcagcttat aatggttaca aataaagcaa tagcatcaca aatttcacaa ataaagcatt tttttcactg cattctagtt 
^6101      ^6111      ^6121      ^6131      ^6141      ^6151      ^6161      ^6171      ^6181      ^6191      

gtggtttgtc caaactcatc aatgtatctt atcatgtctg cctagagggc cctattctat agtgtcacct aaatgctaga gctcgctgat cagcctcgac 
^6201      ^6211      ^6221      ^6231      ^6241      ^6251      ^6261      ^6271      ^6281      ^6291      

tgtgccttct agttgccagc catctgttgt ttgcccctcc cccgtgcctt ccttgaccct ggaaggtgcc actcccactg tcctttccta ataaaatgag 
^6301      ^6311      ^6321      ^6331      ^6341      ^6351      ^6361      ^6371      ^6381      ^6391      

gaaattgcat cgcattgtct gagtaggtgt cattctattc tggggggtgg ggtggggcag gacagcaagg gggaggattg ggaagacaat agcaggcatg 
^6401      ^6411      ^6421      ^6431      ^6441      ^6451      ^6461      ^6471      ^6481      ^6491      

ctggggatgc ggtgggctct atggcttctg aggcggaaag aaccagctgg ggctctaggg ggtatcccca cgcgccctgt agcggcgcat taagcgcggc 
^6501      ^6511      ^6521      ^6531      ^6541      ^6551      ^6561      ^6571      ^6581      ^6591      

gggtgtggtg gttacgcgca gcgtgaccgc tacacttgcc agcgccctag cgcccgctcc tttcgctttc ttcccttcct ttctcgccac gttcgccggc 
^6601      ^6611      ^6621      ^6631      ^6641      ^6651      ^6661      ^6671      ^6681      ^6691      

tttccccgtc aagctctaaa tcggggcatc cctttagggt tccgatttag tgctttacgg cacctcgacc ccaaaaaact tgattagggt gatggttcac 
^6701      ^6711      ^6721      ^6731      ^6741      ^6751      ^6761      ^6771      ^6781      ^6791      

gtagtgggcc atcgccctga tagacggttt ttcgcccttt gacgttggag tccacgttct ttaatagtgg actcttgttc caaactggaa caacactcaa 
^6801      ^6811      ^6821      ^6831      ^6841      ^6851      ^6861      ^6871      ^6881      ^6891      

ccctatctcg gtctattctt ttgatttata agggattttg gggatttcgg cctattggtt aaaaaatgag ctgatttaac aaaaatttaa cgcgaattaa 
^6901      ^6911      ^6921      ^6931      ^6941      ^6951      ^6961      ^6971      ^6981      ^6991      

ttctgtggaa tgtgtgtcag ttagggtgtg gaaagtcccc aggctcccca ggcaggcaga agtatgcaaa gcatgcatct caattagtca gcaaccaggt 
^7001      ^7011      ^7021      ^7031      ^7041      ^7051      ^7061      ^7071      ^7081      ^7091      

gtggaaagtc cccaggctcc ccagcaggca gaagtatgca aagcatgcat ctcaattagt cagcaaccat agtcccgccc ctaactccgc ccatcccgcc 
^7101      ^7111      ^7121      ^7131      ^7141      ^7151      ^7161      ^7171      ^7181      ^7191      

cctaactccg cccagttccg cccattctcc gccccatggc tgactaattt tttttattta tgcagaggcc gaggccgcct ctgcctctga gctattccag 
^7201      ^7211      ^7221      ^7231      ^7241      ^7251      ^7261      ^7271      ^7281      ^7291      

aagtagtgag gaggcttttt tggaggccta ggcttttgca aaaagctccc gggagcttgt atatccattt tcggatctga tcaagagaca ggatgaggat 
^7301      ^7311      ^7321      ^7331      ^7341      ^7351      ^7361      ^7371      ^7381      ^7391      

cgtttcgcat gattgaacaa gatggattgc acgcaggttc tccggccgct tgggtggaga ggctattcgg ctatgactgg gcacaacaga caatcggctg 
^7401      ^7411      ^7421      ^7431      ^7441      ^7451      ^7461      ^7471      ^7481      ^7491      

ctctgatgcc gccgtgttcc ggctgtcagc gcaggggcgc ccggttcttt ttgtcaagac cgacctgtcc ggtgccctga atgaactgca ggacgaggca 
^7501      ^7511      ^7521      ^7531      ^7541      ^7551      ^7561      ^7571      ^7581      ^7591      

gcgcggctat cgtggctggc cacgacgggc gttccttgcg cagctgtgct cgacgttgtc actgaagcgg gaagggactg gctgctattg ggcgaagtgc 
^7601      ^7611      ^7621      ^7631      ^7641      ^7651      ^7661      ^7671      ^7681      ^7691      

cggggcagga tctcctgtca tctcaccttg ctcctgccga gaaagtatcc atcatggctg atgcaatgcg gcggctgcat acgcttgatc cggctacctg 
^7701      ^7711      ^7721      ^7731      ^7741      ^7751      ^7761      ^7771      ^7781      ^7791      

cccattcgac caccaagcga aacatcgcat cgagcgagca cgtactcgga tggaagccgg tcttgtcgat caggatgatc tggacgaaga gcatcagggg 
^7801      ^7811      ^7821      ^7831      ^7841      ^7851      ^7861      ^7871      ^7881      ^7891      

ctcgcgccag ccgaactgtt cgccaggctc aaggcgcgca tgcccgacgg cgaggatctc gtcgtgaccc atggcgatgc ctgcttgccg aatatcatgg 
^7901      ^7911      ^7921      ^7931      ^7941      ^7951      ^7961      ^7971      ^7981      ^7991      

tggaaaatgg ccgcttttct ggattcatcg actgtggccg gctgggtgtg gcggaccgct atcaggacat agcgttggct acccgtgata ttgctgaaga 
^8001      ^8011      ^8021      ^8031      ^8041      ^8051      ^8061      ^8071      ^8081      ^8091      

gcttggcggc gaatgggctg accgcttcct cgtgctttac ggtatcgccg ctcccgattc gcagcgcatc gccttctatc gccttcttga cgagttcttc 
^8101      ^8111      ^8121      ^8131      ^8141      ^8151      ^8161      ^8171      ^8181      ^8191      

tgagcgggac tctggggttc gaaatgaccg accaagcgac gcccaacctg ccatcacgag atttcgattc caccgccgcc ttctatgaaa ggttgggctt 
^8201      ^8211      ^8221      ^8231      ^8241      ^8251      ^8261      ^8271      ^8281      ^8291      

cggaatcgtt ttccgggacg ccggctggat gatcctccag cgcggggatc tcatgctgga gttcttcgcc caccccaact tgtttattgc agcttataat 
^8301      ^8311      ^8321      ^8331      ^8341      ^8351      ^8361      ^8371      ^8381      ^8391      

ggttacaaat aaagcaatag catcacaaat ttcacaaata aagcattttt ttcactgcat tctagttgtg gtttgtccaa actcatcaat gtatcttatc 
^8401      ^8411      ^8421      ^8431      ^8441      ^8451      ^8461      ^8471      ^8481      ^8491      

atgtctgtat accgtcgacc tctagctaga gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa ttgttatccg ctcacaattc cacacaacat 
^8501      ^8511      ^8521      ^8531      ^8541      ^8551      ^8561      ^8571      ^8581      ^8591      

acgagccgga agcataaagt gtaaagcctg gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca gtcgggaaac 
^8601      ^8611      ^8621      ^8631      ^8641      ^8651      ^8661      ^8671      ^8681      ^8691      

ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct 
^8701      ^8711      ^8721      ^8731      ^8741      ^8751      ^8761      ^8771      ^8781      ^8791      

cggtcgttcg gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg ggataacgca ggaaagaaca tgtgagcaaa 
^8801      ^8811      ^8821      ^8831      ^8841      ^8851      ^8861      ^8871      ^8881      ^8891      

aggccagcaa aaggccagga accgtaaaaa ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg acgctcaagt 
^8901      ^8911      ^8921      ^8931      ^8941      ^8951      ^8961      ^8971      ^8981      ^8991      

cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat 
^9001      ^9011      ^9021      ^9031      ^9041      ^9051      ^9061      ^9071      ^9081      ^9091      

acctgtccgc ctttctccct tcgggaagcg tggcgctttc tcaatgctca cgctgtaggt atctcagttc ggtgtaggtc gttcgctcca agctgggctg 
^9101      ^9111      ^9121      ^9131      ^9141      ^9151      ^9161      ^9171      ^9181      ^9191      

tgtgcacgaa ccccccgttc agcccgaccg ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc actggcagca 
^9201      ^9211      ^9221      ^9231      ^9241      ^9251      ^9261      ^9271      ^9281      ^9291      

gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga gttcttgaag tggtggccta actacggcta cactagaagg acagtatttg 
^9301      ^9311      ^9321      ^9331      ^9341      ^9351      ^9361      ^9371      ^9381      ^9391      

gtatctgcgc tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac caccgctggt agcggtggtt tttttgtttg 
^9401      ^9411      ^9421      ^9431      ^9441      ^9451      ^9461      ^9471      ^9481      ^9491      

caagcagcag attacgcgca gaaaaaaagg atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc acgttaaggg 
^9501      ^9511      ^9521      ^9531      ^9541      ^9551      ^9561      ^9571      ^9581      ^9591      

attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt 
^9601      ^9611      ^9621      ^9631      ^9641      ^9651      ^9661      ^9671      ^9681      ^9691      

ctgacagtta ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt tgcctgactc cccgtcgtgt agataactac 
^9701      ^9711      ^9721      ^9731      ^9741      ^9751      ^9761      ^9771      ^9781      ^9791      

gatacgggag ggcttaccat ctggccccag tgctgcaatg ataccgcgag acccacgctc accggctcca gatttatcag caataaacca gccagccgga 
^9801      ^9811      ^9821      ^9831      ^9841      ^9851      ^9861      ^9871      ^9881      ^9891      

agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt 
^9901      ^9911      ^9921      ^9931      ^9941      ^9951      ^9961      ^9971      ^9981      ^9991      

tgcgcaacgt tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag ctccggttcc caacgatcaa ggcgagttac 
^10001     ^10011     ^10021     ^10031     ^10041     ^10051     ^10061     ^10071     ^10081     ^10091     

atgatccccc atgttgtgca aaaaagcggt tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat ggttatggca 
^10101     ^10111     ^10121     ^10131     ^10141     ^10151     ^10161     ^10171     ^10181     ^10191     

gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac 
^10201     ^10211     ^10221     ^10231     ^10241     ^10251     ^10261     ^10271     ^10281     ^10291     

cgagttgctc ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat cattggaaaa cgttcttcgg ggcgaaaact 
^10301     ^10311     ^10321     ^10331     ^10341     ^10351     ^10361     ^10371     ^10381     ^10391     

ctcaaggatc ttaccgctgt tgagatccag ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt ttctgggtga 
^10401     ^10411     ^10421     ^10431     ^10441     ^10451     ^10461     ^10471     ^10481     ^10491     

gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt 
^10501     ^10511     ^10521     ^10531     ^10541     ^10551     ^10561     ^10571     ^10581     ^10591     

atcagggtta ttgtctcatg ag
^10601     ^10611     ^10621

GenBank formatted file with annotated plasmid sequence hyperlinked from vector image map:

A promoter reported in cDNA corresponding to IRES sequence:
not tested The total number of notable open-reading frames (ORFs):
2

Notable Open-Reading Frames (ORFs; protein coding regions) in the mRNA/+RNA sequence:

ORF

ORF position:

1

Version: `0`
Originaly submitted by: Václav Vopálenský	Reviewed by: Martin Mokrejš

The abbreviated name of this ORF/gene:
LacZ

The description of the protein encoded in this ORF:
beta galactosidase

The translational frameshift (ribosome slippage) involved:
0 The ribosome read-through involved:
no

The alternative forms of this protein occur by the alternative initiation of translation:

not tested

The ORF absolute position (the base range includes START and STOP codons or their equivalents):

252-3395

ORF

ORF position:

2

Version: `1`	Last change: `2008-10-27 23:50:32`
Originaly submitted by: Václav Vopálenský	Reviewed by: Martin Mokrejš

The abbreviated name of this ORF/gene:
CAT

The description of the protein encoded in this ORF:
chloramphenicol acetyltransferase

The translational frameshift (ribosome slippage) involved:
0 The ribosome read-through involved:
no

The alternative forms of this protein occur by the alternative initiation of translation:

not tested

The ORF absolute position (the base range includes START and STOP codons or their equivalents):

3733-4392

Citations:

Warnakulasuriyarachchi D., Cerquozzi S., Cheung H. H., Holcik M. (2004) Translational induction of the inhibitor of apoptosis protein HIAP2 during endoplasmic reticulum stress attenuates cell death and is mediated via an inducible internal ribosome entry site element. J. Biol. Chem. 279(17):17148-17157

Last change to the database: 2019-03-18 09:32:49 GMT+1