IRESite Id IRES name IRES functional status IRES overlaps with promoter Gene/virus name IRES from gene Plasmid name Record
type
IRES Seq Id IRES Struct Id 2D Struct Id IRES
found
in
Translated
in
Transl.
method
mRNA topol. O
R
F
#
Alternat. translat. init. ORF
frame-
shift
Transl.
read-
through
mRNA size [nt] IRES size [nt] mRNA origin IRES origin in eng. mRNA
37 BVDV1_1-385
BVDV1_29-391
not tested BVDV1 natur... 52
691
3 Bovine vir... linear 1 no 0 no 12573 385
363
viral
9 BVDV1 functional not tested BVDV_1 pBi5_BVDV plasm... 25 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3384 900 viral
10 BVDV1_delta1-31 functional not tested BVDV_1 Ia(delta1-31) plasm... 28 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3353 869 viral
13 BVDV1_delta173-191 defective not tested BVDV_1 IIIa(delta173-191) plasm... 37 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3331 847 viral
14 BVDV1_delta208-223 defective not tested BVDV_1 IIIb(delta208-223) plasm... 40 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3368 884 viral
15 BVDV1_delta245-254 defective not tested BVDV_1 IIIc(delta245-254) plasm... 43 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3374 890 viral
16 BVDV1_delta266-293 defective not tested BVDV_1 IIId(delta266-293) plasm... 46 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3356 872 viral
11 BVDV1_delta32-65 functional not tested BVDV_1 Ib(delta32-65) plasm... 31 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3350 866 viral
17 BVDV1_delta323-337 defective not tested BVDV_1 IIIe(delta323-337) plasm... 49 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3369 885 viral
18 BVDV1_delta386-901 defective not tested BVDV_1 ORF(delta386-901) plasm... 52 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
2869 385 viral
12 BVDV1_delta78-137 defective not tested BVDV_1 II(delta78-137) plasm... 34 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3324 840 viral
19 BVDV1_in102-105 defective not tested BVDV_1 IIa-b(In102-105) plasm... 55 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3388 904 viral
20 BVDV1_in170-173 defective not tested BVDV_1 IIIa(In170-173) plasm... 58 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3388 904 viral
21 BVDV1_in225-228 defective not tested BVDV_1 IIIb(In225-228) plasm... 61 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3388 904 viral
22 BVDV1_in237-244 defective not tested BVDV_1 IIIb-c(In237-244) plasm... 64 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3392 908 viral
24 BVDV1_in375-378 defective not tested BVDV_1 AUG(In375-378) plasm... 70 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3388 904 viral
23 BVDV1_in63-66 functional not tested BVDV_1 Ib(In63-66) plasm... 67 Bovine vir... 1xCercopit... 1xin vivo linear 2 no
no
0
0
no
no
3388 904 viral
Last change to the database: 2015-04-16 16:45:23 GMT+1