IRESite Id IRES name IRES functional status IRES overlaps with promoter Gene/virus name IRES from gene Plasmid name Record
type
IRES Seq Id IRES Struct Id 2D Struct Id IRES
found
in
Translated
in
Transl.
method
mRNA topol. O
R
F
#
Alternat. translat. init. ORF
frame-
shift
Transl.
read-
through
mRNA size [nt] IRES size [nt] mRNA origin IRES origin in eng. mRNA
148 CSFV not tested CSFV natur... 450 Classical ... linear 1 no 0 no 12311 373 viral
145 CSFV+14 functional not tested CSFV pRLuc-CSFV+14-CAT plasm... 613 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2261 387 viral
150 CSFV+14 functional not tested CSFV pRLuc-CSFV+14-hpCAT plasm... 613 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2285 387 viral
147 CSFV+3 functional not tested CSFV pRLuc-CSFV+3-CAT plasm... 616 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2249 376 viral
149 CSFV+3 functional not tested CSFV pRLuc-CSFV+3-hpCAT plasm... 616 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2273 376 viral
146 CSFV+32 functional not tested CSFV pRLuc-CSFV+32-CAT plasm... 619 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2279 405 viral
151 CSFV+32 functional not tested CSFV pRLuc-CSFV+32-hpCAT plasm... 619 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2303 405 viral
144 CSFV+55 functional not tested CSFV pRLuc-CSFV+55-CAT plasm... 632 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2300 426 viral
152 CSFV+55 functional not tested CSFV pRLuc-CSFV+55-hpCAT plasm... 624 Classical ... 1xrabbit r... 1xin vitro linear 2 not ... 0
0
no
no
2324 428 viral
364 CSFV_1-363 defective not tested CSFV pXLCSFV1-363.NS plasm... 1237 Classical ... 1xrabbit r... 1xin vitro
1xin vivo
linear 2 no
no
0
0
no
no
2610 363 viral
363 CSFV_1-373 defective not tested CSFV pXLCSFV1-373.NS plasm... 1234 Classical ... 1xrabbit r... 1xin vitro
1xin vivo
linear 2 no
no
0
0
no
no
2619 373 viral
362 CSFV_1-382 defective not tested CSFV pXLCSFV1-382.NS plasm... 1231 Classical ... 1xrabbit r... 1xin vitro
1xin vivo
linear 2 no
no
0
0
no
no
2629 382 viral
361 CSFV_1-409 functional not tested CSFV pXLCSFV1-409.NS plasm... 1228 Classical ... 1xrabbit r... 1xin vitro
1xin vivo
linear 2 no
no
0
0
no
no
2656 409 viral
360 CSFV_1-423 functional not tested CSFV pXLCSFV1-423.NS plasm... 1226 Classical ... 1xrabbit r... 1xin vitro
1xin vivo
linear 2 no
no
0
0
no
no
2668 423 viral
359 CSFV_1-442 functional not tested CSFV pXLCSFV1-442.NS plasm... 1223 45 Classical ... 2xrabbit r... 2xin vitro
1xin vivo
linear 2 no
no
0
0
no
no
2689 442 viral
509 CSFV_1-442delta164-179insC defective not tested CSFV pXLCSFV1-442.NSdelta164-179insC plasm... 1659 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2674 442 viral
391 CSFV_1-442_131GUC defective not tested CSFV pXLCSFV1-442.NS131GUC plasm... 1293 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
393 CSFV_1-442_131GUC/342GAC defective not tested CSFV pXLCSFV1-442.NS131GUC/342GAC plasm... 1299 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
508 CSFV_1-442_170C173C functional not tested CSFV pXLCSFV1-442.NS170C173C plasm... 1656 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
503 CSFV_1-442_170G173G functional not tested CSFV pXLCSFV1-442.NS170G173G plasm... 1641 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
504 CSFV_1-442_170G173U functional not tested CSFV pXLCSFV1-442.NS170G173U plasm... 1644 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
506 CSFV_1-442_170U173C functional not tested CSFV pXLCSFV1-442.NS170U173C plasm... 1650 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
505 CSFV_1-442_170U173G functional not tested CSFV pXLCSFV1-442.NS170U173G plasm... 1647 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
507 CSFV_1-442_170U173U functional not tested CSFV pXLCSFV1-442.NS170U173U plasm... 1653 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
493 CSFV_1-442_171AA functional not tested CSFV pXLCSFV1-442.NS171AA plasm... 1614 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
497 CSFV_1-442_171AC functional not tested CSFV pXLCSFV1-442.NS171AC plasm... 1624 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
499 CSFV_1-442_171CC functional not tested CSFV pXLCSFV1-442.NS171CC plasm... 1630 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
501 CSFV_1-442_171UC functional not tested CSFV pXLCSFV1-442.NS171UC plasm... 1635 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
502 CSFV_1-442_171UG functional not tested CSFV pXLCSFV1-442.NS325UG plasm... 1638 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
398 CSFV_1-442_325UC defective not tested CSFV pXLCSFV1-442.NS325UC plasm... 1311 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
429 CSFV_1-442_325UC357GA functional not tested CSFV pXLCSFV1-442.NS325UC357GA plasm... 1388 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
430 CSFV_1-442_327UC defective not tested CSFV pXLCSFV1-442.NS327UC plasm... 1391 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
433 CSFV_1-442_327UC355GA functional not tested CSFV pXLCSFV1-442.NS327UC355GA plasm... 1400 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
392 CSFV_1-442_342GAC defective not tested CSFV pXLCSFV1-442.NS342GAC plasm... 1296 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
451 CSFV_1-442_349U351UU defective not tested CSFV pXLCSFV1-442.NS349U351UU plasm... 1457 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
449 CSFV_1-442_349U352U defective not tested CSFV pXLCSFV1-442.NS349U352U plasm... 1451 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
450 CSFV_1-442_349UU353U defective not tested CSFV pXLCSFV1-442.NS349UU353U plasm... 1454 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
448 CSFV_1-442_349UUU defective not tested CSFV pXLCSFV1-442.NS349UUU plasm... 1444 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
453 CSFV_1-442_349UUUUU defective not tested CSFV pXLCSFV1-442.NS349UUUUU plasm... 1463 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
452 CSFV_1-442_350UUUU defective not tested CSFV pXLCSFV1-442.NS350UUUU plasm... 1460 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
447 CSFV_1-442_351UUU defective not tested CSFV pXLCSFV1-442.NS351UUU plasm... 1441 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
446 CSFV_1-442_352U functional not tested CSFV pXLCSFV1-442.NS352U plasm... 1438 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
440 CSFV_1-442_352UU functional not tested CSFV pXLCSFV1-442.NS352UU plasm... 1418 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
434 CSFV_1-442_353U functional not tested CSFV pXLCSFV1-442.NS353U plasm... 1403 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
432 CSFV_1-442_355GA defective not tested CSFV pXLCSFV1-442.NS355GA plasm... 1397 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
427 CSFV_1-442_357GA defective not tested CSFV pXLCSFV1-442.NS357GA plasm... 1382 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2689 442 viral
454 CSFV_1-442_delta349-353 defective not tested CSFV pXLCSFV1-442.NSdelta349-353 plasm... 1466 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2684 437 viral
389 CSFV_130-423 defective not tested CSFV pXLCSFV130-423.NS plasm... 1287 Classical ... 1xHomo sap... 1xin vivo linear 2 no
no
0
0
no
no
2556 294 viral
390 CSFV_143-423 defective not tested CSFV pXLCSFV143-423.NS plasm... 1290 Classical ... 1xHomo sap... 1xin vivo linear 2 no
no
0
0
no
no
2543 281 viral
387 CSFV_2-423 functional not tested CSFV pXLCSFV2-423.NS plasm... 1281 Classical ... 1xHomo sap... 1xin vivo linear 2 no
no
0
0
no
no
2684 422 viral
388 CSFV_65-423 functional not tested CSFV pXLCSFV65-423.NS plasm... 1284 Classical ... 1xHomo sap... 1xin vivo linear 2 no
no
0
0
no
no
2621 359 viral
378 CSFV_C/Cs functional not tested CSFV pXLCSFVC/Cs plasm... 1265 Classical ... 1xrabbit r... 1xin vitro linear 2 no
no
0
0
no
no
2668 423 viral
Last change to the database: 2015-04-16 16:45:23 GMT+1