IRESite Id IRES name IRES functional status IRES overlaps with promoter Gene/virus name IRES from gene Plasmid name Record
type
IRES Seq Id IRES Struct Id 2D Struct Id IRES
found
in
Translated
in
Transl.
method
mRNA topol. O
R
F
#
Alternat. translat. init. ORF
frame-
shift
Transl.
read-
through
mRNA size [nt] IRES size [nt] mRNA origin IRES origin in eng. mRNA
286 ERAV_245-961 not tested ERAV natur... 937 Equine rhi... linear 5 yes
yes
yes
yes
yes
0
0
0
0
0
no
no
no
no
no
7695 712 viral
271 ERAV_1-961 functional not tested ERAV pE1(1-961) plasm... 893 Equine rhi... 2xrabbit r... 2xin vitro
1xin vivo
linear 6 not ... 0
0
0
0
0
0
no
no
no
no
no
no
3184 956 viral
279 ERAV_245-855 defective not tested ERAV pE1(245-855) plasm... 917 Equine rhi... 1xEquine r... 1xin vivo linear 2 no
no
0
0
no
no
2822 611 viral
278 ERAV_245-858 defective not tested ERAV pE1(245-858) plasm... 914 Equine rhi... 1xHomo sap... 1xin vivo linear 2 no
no
0
0
no
no
2825 614 viral
277 ERAV_245-918 functional not tested ERAV pE1(245-918) plasm... 911 Equine rhi... 1xHomo sap... 1xin vivo linear 2 no
yes
0
0
no
no
2885 674 viral
276 ERAV_245-921 functional not tested ERAV pE1(245-921) plasm... 908 Equine rhi... 1xHomo sap... 1xin vivo linear 2 no
yes
0
0
no
no
2888 677 viral
272 ERAV_245-961 functional not tested ERAV pE1(245-961) plasm... 896 Equine rhi... 1xHomo sap... 1xin vivo linear 6 no
yes
yes
yes
yes
yes
0
0
0
0
0
0
no
no
no
no
no
no
2942 715 viral
280 ERAV_245-961_deltaA1 functional not tested ERAV pE1(245-961)deltaA1 plasm... 920 Equine rhi... 1xHomo sap... 1xin vivo linear 5 no
yes
yes
yes
yes
0
0
0
0
0
no
no
no
no
no
2942 715 viral
283 ERAV_245-961_deltaA1_deltaA2 functional not tested ERAV pE1(245-961)deltaA1_deltaA2 plasm... 929 Equine rhi... 1xHomo sap... 1xin vivo linear 4 no
yes
yes
yes
0
0
0
0
no
no
no
no
2942 715 viral
285 ERAV_245-961_deltaA1_deltaA2_deltaA4 functional not tested ERAV pE1(245-961)deltaA1_deltaA2_deltaA4 plasm... 935 Equine rhi... 1xHomo sap... 1xin vivo linear 2 no
yes
0
0
no
no
2942 715 viral
281 ERAV_245-961_deltaA2 functional not tested ERAV pE1(245-961)deltaA2 plasm... 923 Equine rhi... 1xHomo sap... 1xin vivo linear 5 no
yes
yes
yes
yes
0
0
0
0
0
no
no
no
no
no
2942 715 viral
284 ERAV_245-961_deltaA3_deltaA4 functional not tested ERAV pE1(245-961)deltaA3_deltaA4 plasm... 932 Equine rhi... 1xHomo sap... 1xin vivo linear 4 no
yes
yes
yes
0
0
0
0
no
no
no
no
2942 715 viral
273 ERAV_338-961 defective not tested ERAV pE1(338-961) plasm... 899 Equine rhi... 1xHomo sap... 1xin vivo linear 6 no
yes
yes
yes
yes
yes
0
0
0
0
0
0
no
no
no
no
no
no
2848 621 viral
274 ERAV_434-961 defective not tested ERAV pE1(434-961) plasm... 902 Equine rhi... 1xHomo sap... 1xin vivo linear 6 no
yes
yes
yes
yes
yes
0
0
0
0
0
0
no
no
no
no
no
no
2753 526 viral
275 ERAV_508-961 defective not tested ERAV pE1(508-961) plasm... 905 Equine rhi... 1xHomo sap... 1xin vivo linear 6 no
yes
yes
yes
yes
yes
0
0
0
0
0
0
no
no
no
no
no
no
2680 453 viral
282 ERAV_245-961_deltaA2_deltaGNRA defective not tested ERAV pE1(245-961)deltaA2_deltaGNRA plasm... 926 Equine rhi... linear 1 no 0 no 2942 715 viral
Last change to the database: 2015-04-16 16:45:23 GMT+1