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IRESite: The database of experimentally verified IRES structures |  |
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| IRESite Id | IRES name | IRES functional status | IRES overlaps with promoter | Gene/virus name | IRES from gene | Plasmid name | Record type |
IRES Seq Id | IRES Struct Id | 2D Struct Id | IRES found in |
Translated in |
Transl. method |
mRNA topol. | O R F # |
Alternat. translat. init. | ORF frame- shift |
Transl. read- through |
mRNA size [nt] | IRES size [nt] | mRNA origin | IRES origin in eng. mRNA |
| 69 | gypsy_env gypsyD5 gypsyD2 |
not tested | Gypsy | natur... | 687 688 689 |
Drosophila... | linear | 2 | no no |
0 +2 |
no no |
7468 | 330 261 517 |
viral | ||||||||
| 439 | gypsy | functional | not tested | gypsy | pDC-WT | plasm... | 1394 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
3203 | 846 | nuclear | ||||
| 463 | gypsy | defective | no (not co... | gypsy | pMC-WT | plasm... | 1515 | Drosophila... | 1xDrosophi... | 1xin vivo | linear | 1 | not ... | 0 | no | 4261 | 846 | nuclear | ||||
| 441 | gypsyD1 | functional | not tested | gypsy | pDC-delta_1 | plasm... | 1421 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
2873 | 516 | nuclear | ||||
| 464 | gypsyD1 | defective | no (not co... | gypsy | pMC-delta_1 | plasm... | 1518 | Drosophila... | 1xDrosophi... | 1xin vivo | linear | 1 | not ... | 0 | no | 3931 | 516 | nuclear | ||||
| 442 | gypsyD2 | functional | not tested | gypsy | pDC-delta_2 | plasm... | 1424 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 1 | not ... | 0 | no | 2674 | 317 | nuclear | ||||
| 444 | gypsyD3 | defective | not tested | gypsy | pDC-delta_3 | plasm... | 1432 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
2540 | 183 | nuclear | ||||
| 445 | gypsyD4 | defective | not tested | gypsy | pCD-delta_4 | plasm... | 1435 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
2435 | 79 | nuclear | ||||
| 443 | gypsyD5 | functional | not tested | gypsy | pDC-delta_5 | plasm... | 1428 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
2622 | 265 | nuclear | ||||
| 459 | gypsy_env | functional | not tested | gypsy | pDC-Env | plasm... | 1508 | Drosophila... | 1xrabbit r... | 1xin vitro | linear | 2 | not ... | 0 0 |
no no |
4770 | 330 | nuclear | ||||
| 461 | gypsy_env | functional | no (not co... | gypsy | pDC-Env | plasm... | 1510 | Drosophila... | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
4770 | 330 | nuclear | ||||
| 462 | gypsy_env | functional | no (not co... | gypsy | pMC-Env | plasm... | 687 | Drosophila... | 1xHomo sap... | 1xin vivo | linear | 1 | not ... | 0 | no | 3745 | 330 | nuclear | ||||
| 431 | gypsy | functional | not tested | gypsy | pMC-WT | plasm... | 1394 | Drosophila... | linear | 1 | not ... | 0 | no | 2193 | 846 | nuclear |