IRESite: The database of experimentally verified IRES structures
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Viral IRESs
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ITAFs of viral IRESs
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The list of IRES
trans
-acting factors is unfortunately not yet complete neither is the list of ribosomal and other proteins found to interact with IRES directly or indirectly.
IRESite Id
IRES name
Gene name
IRES
found
in
IRES size [nt]
mRNA origin
ITAF abbrev.
Other interacting proteins
57
AML1/RUNX1
AML1/RUNX1
Homo sapiens
1561
nuclear
71
Antp-D
Antp-DE
Antp-CDE
Antp
Drosophila...
252
408
1730
nuclear
342
Apaf-1
Apaf-1
Mus musculus
583
nuclear
110
Apaf-1
Apaf-1
Homo sapiens
231
nuclear
491
AQP4
AQP4
Homo sapiens
284
nuclear
La
PTB-1
106
BAG1_p36delta236nt
BAG1_p36
BAG-1
Homo sapiens
130
366
nuclear
103
BCL2
BCL2
Homo sapiens
1137
nuclear
570
BiP_-222_-3
BiP
Homo sapiens
222
nuclear
259
c-IAP1_285-1399
c-IAP1_1313-1462
c-IAP1
Homo sapiens
1115
150
nuclear
p97/DAP5/NAT1
48
c-jun
c-jun
Gallus gallus
301
nuclear
471
MYB
c-myb
Homo sapiens
150
nuclear
PTB-1
PTB-2
PTB-4
nPTB
La
p97/DAP5/NAT1
ITAF45
35
c-myc
c-myc
Homo sapiens
393
nuclear
438
Cat-1_224
Cat-1
Rattus nor...
224
nuclear
PTB
hnRNP_L
258
CCND1
CCND1
Homo sapiens
209
nuclear
117
DAP5
DAP5
Homo sapiens
305
nuclear
548
eIF4G
eIF4G
Homo sapiens
357
nuclear
576
eIF4GI-ext
eIF4GI
Homo sapiens
196
nuclear
574
eIF4GII-long
eIF4GII
Homo sapiens
327
nuclear
573
eIF4GII
eIF4GII
Homo sapiens
256
nuclear
492
ELG1
ELG1
Homo sapiens
460
nuclear
La
hnRNP_A1
241
ELH
ELH
Aplysia ca...
319
nuclear
519
FGF1A
FGF1
Homo sapiens
434
nuclear
122
FMR1
FMR1
Homo sapiens
252
nuclear
204
Gtx-133-141
Gtx-1-166
Gtx-1-120
Gtx-1-196
Gtx
Mus musculus
9
166
120
196
nuclear
66
hairless
Hairless
Drosophila...
435
nuclear
116
HAP4
HAP4
Saccharomy...
270
nuclear
83
AT1R_var2
hAT1R-A
Homo sapiens
272
nuclear
82
AT1R_var1
hAT1R-B
Homo sapiens
356
nuclear
84
AT1R_var3
hAT1R-C
Homo sapiens
330
nuclear
85
AT1R_var4
hAT1R-D
Homo sapiens
414
nuclear
1
HIF1a
Hif1a
Mus musculus
257
nuclear
58
hSNM1
hSNM1
Homo sapiens
918
nuclear
46
Hsp101
Hsp101
Zea mays
161
nuclear
67
hsp70
Hsp70Aa
Drosophila...
503
nuclear
331
Hsp90
Hsp83
Drosophila...
149
nuclear
118
hsp70
HSPA1A
Homo sapiens
193
nuclear
337
IGF2_leader2
IGF2
Homo sapiens
121
nuclear
124
Kv1.4_1.2
Kcna4
Mus musculus
1197
nuclear
89
L-myc
L-myc
Homo sapiens
52
nuclear
583
LamB1_-335_-1
LamB1
Homo sapiens
335
nuclear
220
LEF1
LEF1
Homo sapiens
1167
nuclear
51
MNT_75-267
MNT_36-160
MNT
Homo sapiens
193
125
nuclear
PTB-1
PTB-2
PTB-4
nPTB
La
p97/DAP5/NAT1
ITAF45
474
MTG8a
MTG8a
Homo sapiens
199
nuclear
PTB-1
PTB-2
PTB-4
nPTB
La
p97/DAP5/NAT1
ITAF45
49
MYT2_997-1152
MYT2
Homo sapiens
156
nuclear
55
n-MYC
n-MYC
Homo sapiens
320
nuclear
287
NDST1
NDST1
Mus musculus
420
nuclear
288
NDST2
NDST2
Mus musculus
750
nuclear
289
NDST3
NDST3
Mus musculus
247
nuclear
290
NDST4L
NDST4L
Mus musculus
672
nuclear
291
NDST4S
NDST4S
Mus musculus
418
nuclear
243
NRF_-653_-17
NRF
Homo sapiens
637
nuclear
JKTBP1
612
NtHSF1
NtHSF1
Nicotiana ...
453
nuclear
107
ODC1
ODC1
Rattus nor...
303
nuclear
457
p27kip1
p27kip1
Homo sapiens
152
nuclear
599
p53_128-269
p53/p47
Homo sapiens
142
nuclear
102
PDGF2/c-sis
PDGF2/c-sis
Homo sapiens
1022
nuclear
138
Pim-1
PIM1
Homo sapiens
396
nuclear
436
PITSLRE_p58
PITSLRE
Homo sapiens
381
nuclear
Unr
8
Rbm3
Rbm3
Mus musculus
22
nuclear
62
reaper
Rpr
Drosophila...
168
nuclear
111
Scamper
Scamper
Canis fami...
365
nuclear
629
TFIID
TBP1
Saccharomy...
188
nuclear
572
TIF4631
TIF4631
Saccharomy...
348
nuclear
65
Ubx_1-966
Ubx_373-961
Ubx
Drosophila...
966
589
nuclear
81
UNR
UNR
Homo sapiens
429
nuclear
115
Ure2
Ure2
Saccharomy...
167
nuclear
223
UtrA
Utrn
Mus musculus
506
nuclear
571
VEGF-A_-133_-1
VEGF-A
Mus musculus
133
nuclear
109
XIAP_5-464
XIAP_305-466
XIAP
Homo sapiens
460
162
nuclear
hnRNP_A1
La
hnRNP_C1/C2
PTB-1
628
YAP1
YAP1
Saccharomy...
164
nuclear
Last change to the database: 2019-03-18 09:32:49 GMT+1